| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4196 |
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| Symbol | |
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| ID | 6143210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4296600 |
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| End bp | 4297496 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641619019 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001746147 |
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| Protein GI | 170683410 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00191866 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCATCT CAGACGAAAC GCTTCGTGTT ATTCATCTGG TCGCCAGACA CCAGAGCATT
ACCACCGCAG CCGAGCAGTT AAATAAAGTC CCTTCCGCCA TCAGTTACAC CATCAAGAAA
GCGGAAGAGA GCCTGGGCGT TGAACTGTTC ATTCGTAAGG GACGCTATAT TGAATTATCG
CCAGCGGGAA GTTACTTCAT CGAACATAGC AAAACTATTC TTGGCGACCT GGAAGCATTA
AAGCGCAACA CAGTGCTGAT TCACGATGGT ATTGAGCGTG AACTGACAAT TGCGGTAAAC
AATATTATTC CTGGTGATTT GCTGGTGGCA TTTATTCGAG ATTTTGAACG GCAATTCACA
TCAACAACAC TGACGGTAGA TCTTGAGGTA TACAACGGCT GCTGGGATGC GCTGTACAGT
AAGCGTGCCG ATCTGGTCTA CGGTGCTCCT CATGCAGTGC CAAGCAGTGA AGGCATCATT
AGCGAACCGG TCGGACAAAT GGAATGGGAT TTTGTCGTCA GCCCACTCCA CCCACTGGCA
GCGAAGCGGC ATCCATTAGA AAACAGTGAA TTGCGTCATT ATCCAGCGGT TTGTATCCGC
GATACCTCCG TTAACTTCCC CCCGATGCAA GCCTGGTTGT TGGAAGGACA AAAACCCATT
TTTGTTCCTG ACTTCGCTAC GGCAATCGCC TTAATAGAAC AAAACGTCGG TATTGGTTAT
ATTCCACATC ATCTGGCATT GCCGTTATTG AACAGCGGTA AATTGCTTAA AAAGCCAATG
CGCGAACATA AACACGCCAC CAAGTTATTT CTTGCCGCTC GTTCCGATGG TATGGGCAAA
GCCTGTCAGT GGTGCATAGA ATATTTAAGA AATCCGCAAT TAATTTTCTG TTCCTGA
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| Protein sequence | MFISDETLRV IHLVARHQSI TTAAEQLNKV PSAISYTIKK AEESLGVELF IRKGRYIELS
PAGSYFIEHS KTILGDLEAL KRNTVLIHDG IERELTIAVN NIIPGDLLVA FIRDFERQFT
STTLTVDLEV YNGCWDALYS KRADLVYGAP HAVPSSEGII SEPVGQMEWD FVVSPLHPLA
AKRHPLENSE LRHYPAVCIR DTSVNFPPMQ AWLLEGQKPI FVPDFATAIA LIEQNVGIGY
IPHHLALPLL NSGKLLKKPM REHKHATKLF LAARSDGMGK ACQWCIEYLR NPQLIFCS
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