| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4193 |
|---|
| Symbol | |
|---|
| ID | 6143443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4291511 |
|---|
| End bp | 4292311 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641619016 |
|---|
| Product | putative sugar phosphatase |
|---|
| Protein accession | YP_001746144 |
|---|
| Protein GI | 170683030 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00213999 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGG TTGTTGCGTC TGATTTAGAT GGCACGTTAC TTTCTCCCGA CCATACGTTA
TCCCCTTACG CCAAAGAAAC TCTGAAGCTG CTCACCGCGC GCGGCATCAA CTTTGTATTT
GCGACCGGTC GTCACCACGT TGATGTGGGG CAAATTCGCG ATAATCTGGA GATTAAGTCT
TACATGATTA CCTCCAATGG CGCGCGCGTT CACGATCTGG ATGGCAATCT GATTTTTGCT
CATAACCTGG ATCGCGATAT TGCCAGCGAT CTGTTTGGCG TAGTCAACGA CAATCCGGAC
ATCATTACTA ACGTTTATCG CGACGACGAA TGGTTTATGA ATCGTCATCG CCCGGAAGAG
ATGCGCTTTT TTAAAGAAGC GGTATTCAAA TATGCGCTGT ATGAGCCGGG ATTACTGGAG
CCGGAAGGCG TCAGCAAAGT GTTCTTCACC TGCGATTCCC ATGAACAACT GCTGCCGCTG
GAGCAGGCGA TTAATGCTCG CTGGGGCGAT CGCGTCAACG TTAGTTTCTC TACCTTAACC
TGTCTGGAAG TGATGGCGGG CGGCGTGTCG AAAGGCCATG CGCTGGAAGC GGTGGCGAAG
AAACTGGGCT ACAGCCTGCA AGATTGTATT GCCTTTGGCG ATGGCATGAA CGACGCCGAA
ATGCTGTCGA TGGCGGGGAA AGGCTGCATT ATGGGCAGTG CGCACCAGCG TCTGAAAGAT
CTGCATCCGG AACTGGAAGT GATTGGTACT AACGCCGAGG ACGCAGTGCC GCATTATCTG
CGTAAGCTCT ATTTATCGTA A
|
|---|
| Protein sequence | MYQVVASDLD GTLLSPDHTL SPYAKETLKL LTARGINFVF ATGRHHVDVG QIRDNLEIKS
YMITSNGARV HDLDGNLIFA HNLDRDIASD LFGVVNDNPD IITNVYRDDE WFMNRHRPEE
MRFFKEAVFK YALYEPGLLE PEGVSKVFFT CDSHEQLLPL EQAINARWGD RVNVSFSTLT
CLEVMAGGVS KGHALEAVAK KLGYSLQDCI AFGDGMNDAE MLSMAGKGCI MGSAHQRLKD
LHPELEVIGT NAEDAVPHYL RKLYLS
|
|---|
| |