Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4190 |
Symbol | rhtC |
ID | 6145038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4289068 |
End bp | 4289688 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619013 |
Product | threonine efflux system |
Protein accession | YP_001746141 |
Protein GI | 170683014 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00587316 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGATGT TATTCCTCAC CGTCGCCATG GTGCACATTG TGGCGCTTAT GAGCCCCGGT CCCGATTTCT TTTTTGTCTC TCAGACCGCT GTCAGTCGTT CCCGTAAAGA AGCGATGATG GGCGTGCTGG GCATTACCTG CGGCGTAATG GTTTGGGCTG GGATTGCGTT GCTTGGCCTA CATTTGATTA TCGAAAAAAT GGCCTGGCTG CATACGCTGA TTATGGTGGG CGGTGGCCTG TATCTCTGCT GGATGGGTTA CCAGATGCTA CGCGGTGCAC TGAAAAAAGA GGCGGTTTCT GCGCCTGCAC CACAGGTTGA GCTGGCAAAA AGCGGGCGCA GTTTCCTGAA AGGCTTACTG ACCAATCTCG CCAATCCGAA AGCGATTATC TACTTTGGTT CGGTATTCTC GCTGTTTGTC GGCGATAACG TCGGCACCAC TGAGCGCTGG GGCATTTTCG CGTTGATTAT TATCGAAACA CTGGCGTGGT TTACCGTCGT TGCCAGCCTG TTTGCCCTGC CGCAAATGCG CCGTGGTTAT CAACGTCTGG CGAAGTGGAT TGATGGTTTT GCCGGGGCGT TATTTGCCGG ATTTGGCATT CATTTGATTA TTTCGCGTTG A
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Protein sequence | MLMLFLTVAM VHIVALMSPG PDFFFVSQTA VSRSRKEAMM GVLGITCGVM VWAGIALLGL HLIIEKMAWL HTLIMVGGGL YLCWMGYQML RGALKKEAVS APAPQVELAK SGRSFLKGLL TNLANPKAII YFGSVFSLFV GDNVGTTERW GIFALIIIET LAWFTVVASL FALPQMRRGY QRLAKWIDGF AGALFAGFGI HLIISR
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