Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4185 |
Symbol | |
ID | 6143874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4283449 |
End bp | 4284297 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641619008 |
Product | hypothetical protein |
Protein accession | YP_001746136 |
Protein GI | 170684029 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03034] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00996308 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACAACA TATTAGGCTC ATCAATTAAT ATGCCCTGTA CACTTTTCGA AACTATTACT TTATTCGATG ATTTTTCTGC TGATGATATG CAGTATGGGG ATATGGAAGA ACAAGATTTT CTCTCACTCG GCTTAAGCGA CATCTCTGCA AAAGTTGATC CTTACCGCCT CATTAAATAC CATTTTCCTG GGCCGAATTC TACTTATGGT GCTTTTAGTG TTCCAACTTC TGGAACAAAA ATATCACAAA GTGAATGTAT TGATATTTTA TTTGCAGAAA TGAAAGATCT GGCAAAAATG TTTTCCTTTT TTGGACAATA CAAAACACTC ATCCAGGATC TGATTGATCA TTTTAGATAT GGAAATGGCA ACAGTTTCCA TAGCCAGGAA TTGAACTTAT CTTTTCATGA ACGAATAAAC AAATATGATT ATAATAGCCC AATACGTGTA ATCAAAGAAT GTATCGAAAA TGATATTTCT TCAACACCTA CGATAGGATA CCGGCCTCTT CTCCTACAAA AGATTAAGAC CGAATTACTT TCATCAAGAC TAAATAAATT CAATGATTTT AAAGATAATT TTAATGGCAT GGGAATCAGC ATTCATGATA TCTCAGCTCA AAAAATATCT CTTTTAAATT TTCAAAAATA TCCTATGGGC TGGAGCGCTA CCATTCATTT CATAGCACAA GACCACTTTG GTTTGGATGT GACTGATATA AAAAACAAGA TTTACAACAA GTATAGATTT TTTCGCATAT GGTTCTTTTT ACAACGGCAT AAAGACTTTG CTTTCAAACC TTTTTTCACC AATTTTAACA CTATCGAAAG AATCGAAAAT TATCTATGA
|
Protein sequence | MNNILGSSIN MPCTLFETIT LFDDFSADDM QYGDMEEQDF LSLGLSDISA KVDPYRLIKY HFPGPNSTYG AFSVPTSGTK ISQSECIDIL FAEMKDLAKM FSFFGQYKTL IQDLIDHFRY GNGNSFHSQE LNLSFHERIN KYDYNSPIRV IKECIENDIS STPTIGYRPL LLQKIKTELL SSRLNKFNDF KDNFNGMGIS IHDISAQKIS LLNFQKYPMG WSATIHFIAQ DHFGLDVTDI KNKIYNKYRF FRIWFFLQRH KDFAFKPFFT NFNTIERIEN YL
|
| |