Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4180 |
Symbol | |
ID | 6143739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4279850 |
End bp | 4280752 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641619003 |
Product | hypothetical protein |
Protein accession | YP_001746131 |
Protein GI | 170681390 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0314265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CGCTCGCAAC GTTATTTTTA TTAACGTGTC TGGGATCATC ATCCGCCTAT GCGGATAACG CTTTGATTTT ACAAACTGAT TTTAGCCTGA AAGATGGTGC CGTCTCGGCG ATGAAAGGGG TCGCATTCGG CGTTGACCAT AATCTTAAAA TCTTTGATTT AACACACGAA ATTCCACCGT ATAACATCTG GGAAGGCGCT TATCGCCTGT ATCAGACTGC CAGTTACTGG CCGCAAGGTT CGGTGTTTGT TAGCGTGGTC GATCCGGGCG TAGGCACTGA CCGTAAATCG GTAGTGCTGA AAACCAAAAA CGGTCAATAC TTCGTTTCAC CAGATAACGG TACGCTCACT TTGGTGGCAC AAACTCTGGG TATTGATAGC GTCCGAGAAA TCGACGAAAA AGCTAACCGC CTGAAAGGTT CTGAAAAGTC ATATACCTTC CACGGTCGTG ACGTGTATGC CTACACCGGT GCGCGTCTGG CTTCCGGGGC GATTACGTTC GAACAGGTGG GGCCAGAGCT TCCTGCAAAA GTTGTCGAAC TTTCTTATCA GAAAGCAAAA GCAACAAAAG GTGAAGTGAA GGGCAATATC CCGATTCTCG ATATTCAGTA CGGCAACGTC TGGAGCAATA TCAGCGACGA GTTGCTGAAT CAGGCAGGAA TCAAACTCAA CGACACGTTG TGTGTGACCA TTTCCGAAGG TTCCCAGCAA AAATACGCAG GGAAAATGCC ATATGTCGCA AGCTTCGGCG ATGTGCCGGA AGGCCAGCCG ATGGTGTATC TGAACAGCTT ATTGAATGTT TCCGTGGCGC TGAATATGGA TAATTTTGCG CAGAAACATC AGGTTGCGTC TGGTGCTGAC TGGAATATTG ATGTGAAGAA GTGCGCTAAG TAA
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Protein sequence | MKKTLATLFL LTCLGSSSAY ADNALILQTD FSLKDGAVSA MKGVAFGVDH NLKIFDLTHE IPPYNIWEGA YRLYQTASYW PQGSVFVSVV DPGVGTDRKS VVLKTKNGQY FVSPDNGTLT LVAQTLGIDS VREIDEKANR LKGSEKSYTF HGRDVYAYTG ARLASGAITF EQVGPELPAK VVELSYQKAK ATKGEVKGNI PILDIQYGNV WSNISDELLN QAGIKLNDTL CVTISEGSQQ KYAGKMPYVA SFGDVPEGQP MVYLNSLLNV SVALNMDNFA QKHQVASGAD WNIDVKKCAK
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