Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4122 |
Symbol | rbsR |
ID | 6146143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4218026 |
End bp | 4219018 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641618945 |
Product | transcriptional repressor RbsR |
Protein accession | YP_001746083 |
Protein GI | 170680451 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.305602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0911869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTACAA TGAAAGATGT TGCCCGCCTG GCGGGCGTTT CTACCTCAAC AGTTTCTCAC GTTATCAATA AAGATCGCTT CGTCAGTGAA GCGATTACCG CCAAAGTTGA AGCGGCGATT AAAGAACTCA ATTACGCGCC ATCAGCTCTG GCGCGTAGCC TCAAACTCAA TCAAACACAT ACCATTGGCA TGTTGATCAC TGCCAGTACC AATCCTTTCT ATTCAGAACT GGTGCGTGGC GTTGAACGCA GCTGCTTCGA ACGCGGTTAT AGTCTCGTCC TTTGCAATAC CGAAGGCGAT GAACAACGGA TGAATCGCAA TCTGGAAACG CTGATGCAAA AACGCGTTGA TGGCTTGCTG TTACTGTGCA CCGAAACGCA TCAGCCTTCG CGTGAAATCA TGCAACGTTA TCCGACAGTG CCTACCGTGA TGATGGACTG GGCACCGTTC GATGGCGACA GCGATCTTAT TCAGGATAAC TCGTTGCTGG GCGGAGACTT AGCAACGCAA TATCTGATCG ATAAAGGTCA TACCCGTATC GCCTGTATTA CCGGCCCGCT GGATAAAACT CCGGCGCGCC TGAGGTTGGA AGGTTATCGG GCGGCGATGA AACGTGCGGG TCTCAACATT CCTGATGGCT ATGAAGTCAC TGGTGATTTT GAATTTAACG GCGGGTTTGA CGCTATGCGC CAACTGTTAT CACATCCGCT GCGTCCTCAG GCCGTCTTTA CCGGAAATGA CGCTATGGCT GTTGGCGTTT ACCAGGCGCT ATATCAGGCA GAGTTACAGG TTCCGCAGGA TATCGCGGTG ATTGGCTATG ACGATATCGA ACTGGCAAGC TTTATGACGC CACCATTAAC CACTATCCAT CAACCGAAAG ATGAACTGGG GGAGCTGGCG ATTGATGTAC TCATCCATCG GATAACCCAA CCGACCCTTC AGCAACAACG ATTACAACTT ACTCCGATTC TGATGGAACG CGGTTCGGCT TAG
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Protein sequence | MATMKDVARL AGVSTSTVSH VINKDRFVSE AITAKVEAAI KELNYAPSAL ARSLKLNQTH TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL LLCTETHQPS REIMQRYPTV PTVMMDWAPF DGDSDLIQDN SLLGGDLATQ YLIDKGHTRI ACITGPLDKT PARLRLEGYR AAMKRAGLNI PDGYEVTGDF EFNGGFDAMR QLLSHPLRPQ AVFTGNDAMA VGVYQALYQA ELQVPQDIAV IGYDDIELAS FMTPPLTTIH QPKDELGELA IDVLIHRITQ PTLQQQRLQL TPILMERGSA
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