| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4109 |
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| Symbol | gidA |
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| ID | 6146368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4203543 |
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| End bp | 4205432 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618933 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001746071 |
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| Protein GI | 170680590 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0017161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.124027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTATC CGGATCCTTT TGACGTCATC ATCATTGGCG GGGGTCATGC AGGCACCGAG
GCCGCGATGG CCGCGGCGCG TATGGGTCAA CAGACTCTGC TTTTGACACA CAATATCGAC
ACTCTGGGGC AGATGAGCTG CAACCCGGCG ATCGGCGGTA TTGGGAAGGG ACATCTGGTA
AAAGAAGTGG ATGCACTCGG CGGTCTGATG GCGAAAGCGA TCGATCTGGC GGGTATCCAG
TTTAGGATAC TAAACGCAAG TAAGGGACCG GCAGTTCGCG CTACCCGAGC TCAGGCGGAT
CGTGTGCTCT ACCGGCAGGC GGTACGTACG GCGCTGGAGA ACCAACCGAA CCTGATGATC
TTCCAGCAGG CAGTTGAAGA TCTTATTGTC GAAAACGATC GCGTGGTCGG AGCCGTTACC
CAAATGGGAC TGAAGTTCCG TGCCAAAGCT GTCGTGCTCA CCGTTGGGAC GTTCCTCGAC
GGTAAAATTC ATATCGGTCT GGATAACTAC AGCGGTGGCC GTGCTGGTGA TCCGCCGTCC
ATTCCGCTTT CTCGCCGTTT GCGTGAACTG CCGCTGCGCG TTGGTCGTCT GAAAACCGGG
ACACCACCGC GTATTGATGC TCGAACCATC GACTTTAGCG TACTGGCGCA ACAGCATGGC
GATAACCCAA TGCCGGTATT CTCGTTTATG GGCAATGCGT CCCAGCATCC CCAGCAGGTG
CCGTGTTATA TCACTCATAC CAACGAGAAA ACCCATGATG TGATCCGCAG TAACCTCGAT
CGTAGCCCAA TGTACGCAGG GGTGATCGAA GGTGTCGGCC CACGCTACTG CCCGTCGATC
GAAGACAAAG TCATGCGCTT CGCCGACAGA AATCAGCATC AGATCTTCCT TGAACCGGAA
GGGCTGACCT CTAACGAAAT TTATCCGAAC GGTATCTCCA CCAGCCTGCC GTTCGATGTG
CAGATGCAAA TCGTCCGCTC CATGCAGGGG ATGGAAAACG CGAAGATCGT GCGTCCGGGT
TATGCCATTG AGTATGACTT CTTCGATCCA CGCGACCTGA AACCGACGCT GGAGAGCAAG
TTTATCCAGG GGCTGTTCTT TGCTGGTCAG ATTAACGGCA CTACCGGTTA CGAAGAAGCC
GCTGCGCAAG GTTTGCTGGC TGGTCTTAAC GCTGCCCGTC TGTCTGCAGA CAAAGAAGGT
TGGGCTCCGG CGCGTTCTCA GGCGTATCTC GGCGTACTGG TTGATGACCT GTGCACTTTA
GGAACCAAAG AACCGTATCG TATGTTTACC TCGCGCGCAG AATATCGTCT GATGCTGCGC
GAAGATAATG CGGATCTGCG TTTGACTGAA ATCGGTCGTG AACTGGGCCT GGTGGATGAC
GAACGTTGGG CGCGCTTTAA CGAGAAACTT GAGAATATCG AGCGTGAGCG TCAGCGTCTG
AAATCGACCT GGGTAACCCC GTCGGCGGAA GCTGCAGCCG AAGTGAATGC TCACCTGACT
GCGCCACTTT CCCGTGAAGC CAGTGGTGAA GATCTGCTGC GTCGTCCGGA AATGACTTAT
GAAAAATTAA CCACGCTGAC GCCGTTTGCC CCTGCGTTGA CAGACGAACA GGCGGCGGAA
CAGGTTGAGA TTCAGGTTAA ATACGAAGGT TATATCGCGC GCCAGCAAGA TGAGATCGAA
AAGCAGCTGC GTAACGAGAA CACCCTGCTA CCAGCGACGC TGGATTACCG CCAGGTATCC
GGTCTTTCTA ACGAAGTGAT CGCCAAACTT AACGATCACA AACCGGCCTC TATCGGTCAG
GCTTCGCGTA TTTCTGGCGT CACGCCTGCG GCCATCTCCA TTCTGCTGGT GTGGCTGAAA
AAACAGGGTA TGCTGCGTCG TAGCGCATAA
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| Protein sequence | MFYPDPFDVI IIGGGHAGTE AAMAAARMGQ QTLLLTHNID TLGQMSCNPA IGGIGKGHLV
KEVDALGGLM AKAIDLAGIQ FRILNASKGP AVRATRAQAD RVLYRQAVRT ALENQPNLMI
FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS
IPLSRRLREL PLRVGRLKTG TPPRIDARTI DFSVLAQQHG DNPMPVFSFM GNASQHPQQV
PCYITHTNEK THDVIRSNLD RSPMYAGVIE GVGPRYCPSI EDKVMRFADR NQHQIFLEPE
GLTSNEIYPN GISTSLPFDV QMQIVRSMQG MENAKIVRPG YAIEYDFFDP RDLKPTLESK
FIQGLFFAGQ INGTTGYEEA AAQGLLAGLN AARLSADKEG WAPARSQAYL GVLVDDLCTL
GTKEPYRMFT SRAEYRLMLR EDNADLRLTE IGRELGLVDD ERWARFNEKL ENIERERQRL
KSTWVTPSAE AAAEVNAHLT APLSREASGE DLLRRPEMTY EKLTTLTPFA PALTDEQAAE
QVEIQVKYEG YIARQQDEIE KQLRNENTLL PATLDYRQVS GLSNEVIAKL NDHKPASIGQ
ASRISGVTPA AISILLVWLK KQGMLRRSA
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