Gene EcSMS35_4092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4092 
SymbolpstS 
ID6144392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4185067 
End bp4186107 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content52% 
IMG OID641618916 
Productphosphate ABC transporter periplasmic substrate-binding protein PstS 
Protein accessionYP_001746054 
Protein GI170680926 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.559792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA TGCGTACCAC CGTCGCAACT GTTGTCGCCG CGACCTTATC GATGAGTGCT 
TTCTCTGTGT TTGCAGAAGC AAGCCTGACA GGTGCAGGTG CAACCTTCCC TGCGCCGGTG
TATGCCAAAT GGGCTGACAC TTACCAGAAA GAAACCGGTA ATAAAGTTAA CTACCAGGGT
ATCGGTTCTT CCGGTGGCGT AAAACAGATT ATCGCTAATA CCGTTGATTT TGGTGCCTCT
GACGCGCCGC TGTCTGATGA AAAATTGGCT CAGGAAGGCC TGTTCCAGTT CCCGACCGTG
ATTGGCGGCG TGGTGCTGGC TGTTAACATT CCAGGGCTGA AGTCTGGCGA ACTGGTGCTG
GATGGTAAAA CCCTCGGCGA CATCTACCTG GGCAAAATCA AAAAGTGGGA TGATGAAGCC
ATCGCCAAAC TGAATCCGGG TCTGAAACTG CCTTCACAGA ACATTGCTGT CGTGCGCCGT
GCAGATGGCT CCGGGACATC CTTCGTCTTC ACCAGCTACC TGGCGAAAGT GAACGAAGAG
TGGAAAAACA ACGTTGGTAC TGGCTCTACC GTAAAATGGC CGATCGGTCT GGGCGGTAAA
GGTAACGACG GTATCGCCGC GTTCGTTCAG CGTCTGCCGG GTGCAATTGG TTACGTTGAA
TATGCTTACG CGAAGCAGAA CAACCTGGCG TACACCAAAC TGATCTCCGC TGATGGTAAA
CCGGTTAGTC CGACCGAAGA AAACTTCGCT AATGCAGCAA AAGGCGCAGA CTGGAGCAAA
ACATTCGCTC AGGATCTGAC TAACCAGAAA GGCGAAGATG CATGGCCTAT CACTTCTACC
ACGTTCATTC TGATCCATAA AGATCAGAAG AAACCTGAGC AGGGTGTAGA AGTGCTGAAG
TTCTTCGACT GGGCGTACAA AACCGGGGCT AAACAGGCTA ACGACCTGGA TTATGCCAGC
CTGCCGGATA GCGTAGTGGA ACAGGTTCGC GCTGCGTGGA AGACCAATAT TAAAGACAGT
AGCGGCAAGC CGCTGTACTA A
 
Protein sequence
MKVMRTTVAT VVAATLSMSA FSVFAEASLT GAGATFPAPV YAKWADTYQK ETGNKVNYQG 
IGSSGGVKQI IANTVDFGAS DAPLSDEKLA QEGLFQFPTV IGGVVLAVNI PGLKSGELVL
DGKTLGDIYL GKIKKWDDEA IAKLNPGLKL PSQNIAVVRR ADGSGTSFVF TSYLAKVNEE
WKNNVGTGST VKWPIGLGGK GNDGIAAFVQ RLPGAIGYVE YAYAKQNNLA YTKLISADGK
PVSPTEENFA NAAKGADWSK TFAQDLTNQK GEDAWPITST TFILIHKDQK KPEQGVEVLK
FFDWAYKTGA KQANDLDYAS LPDSVVEQVR AAWKTNIKDS SGKPLY