| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4091 |
|---|
| Symbol | pstC |
|---|
| ID | 6143745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4184021 |
|---|
| End bp | 4184980 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641618915 |
|---|
| Product | phosphate transporter permease subunit PstC |
|---|
| Protein accession | YP_001746053 |
|---|
| Protein GI | 170680226 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.541621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA CCAAGCCTGC TTTTAACCCA CCGGGTAAAA AGGGCGACAT AATTTTCAGC
GTGCTGGTAA AACTGGCGGC GCTGATTGTG CTATTGATGT TGGGTGGCAT TATTGTCTCT
CTGATCATCT CATCCTGGCC GAGCATTCAG AAATTTGGTC TGGCTTTCCT GTGGACCAAA
GGGTGGGATG CGCCGAACGA TATCTACGGG GCGCTGGTGC CGATCTACGG TACGCTGGTG
ACCTCGTTTA TCGCGCTGCT GATCGCCGTT CCAGTGAGTT TCGGTATCGC CCTGTTCCTG
ACCGAGCTTG CGCCTGGCTG GCTGAAGCGC CCGCTGGGTA TCGCCATTGA GCTGCTGGCA
GCCATTCCAA GTATCGTTTA CGGCATGTGG GGCTTGTTTA TCTTCGCCCC GCTGTTCGCC
GTTTATTTCC AGGAGCCGGT CGGCAATATC ATGTCGAATA TCCCGATTGT CGGCGCGCTG
TTCTCCGGCC CGGCCTTTGG TATCGGTATC CTCGCGGCAG GCGTAATCCT CGCCATTATG
ATTATTCCGT ACATTGCAGC GGTAATGCGC GATGTATTCG AACAAACCCC GGTGATGATG
AAAGAGTCAG CCTACGGTAT CGGCTGCACC ACCTGGGAAG TTATCTGGCG TATCGTTCTT
CCGTTCACCA AAAATGGGGT TATCGGCGGC ATTATGCTGG GTCTGGGGCG TGCGCTCGGT
GAAACCATGG CGGTGACCTT TATCATCGGT AACACCTACC AGCTCGACAG CGCCTCGCTG
TACATGCCGG GCAACAGTAT CACCTCTGCG CTGGCGAACG AATTTGCGGA AGCGGAATCC
GGTCTGCACG TTGCTGCACT GATGGAACTG GGCCTGATCC TGTTTGTGAT TACCTTCATC
GTCCTCGCCG CATCGAAGTT TATGATTATG CGCCTGGCTA AGAATGAGGG GGCACGCTAA
|
|---|
| Protein sequence | MAATKPAFNP PGKKGDIIFS VLVKLAALIV LLMLGGIIVS LIISSWPSIQ KFGLAFLWTK
GWDAPNDIYG ALVPIYGTLV TSFIALLIAV PVSFGIALFL TELAPGWLKR PLGIAIELLA
AIPSIVYGMW GLFIFAPLFA VYFQEPVGNI MSNIPIVGAL FSGPAFGIGI LAAGVILAIM
IIPYIAAVMR DVFEQTPVMM KESAYGIGCT TWEVIWRIVL PFTKNGVIGG IMLGLGRALG
ETMAVTFIIG NTYQLDSASL YMPGNSITSA LANEFAEAES GLHVAALMEL GLILFVITFI
VLAASKFMIM RLAKNEGAR
|
|---|
| |