Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3985 |
Symbol | spoT |
ID | 6145904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4060424 |
End bp | 4062532 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618811 |
Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
Protein accession | YP_001745950 |
Protein GI | 170679973 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCTGT TTGAAAGCCT GAATCAACTG ATTCAAACCT ACCTGCCGGA AGACCAAATC AAGCGTCTGC GGCAGGCGTA TCTCGTTGCA CGTGATGCTC ACGAGGGGCA AACACGTTCA AGCGGTGAAC CCTATATCAC GCACCCGGTG GCGGTTGCCT GCATTCTGGC CGAGATGAAA CTCGACTATG AAACGCTGAT GGCGGCGCTG CTGCATGACG TGATTGAAGA TACTCCCGCC ACCTACCAGG ACATGGAACA GCTTTTTGGT AAAAGCGTCG CCGAGCTGGT AGAGGGGGTG TCGAAACTTG ATAAGCTCAA GTTCCGCGAT AAGAAAGAGG CGCAGGCCGA AAACTTTCGC AAGATGATTA TGGCGATGGT GCAGGATATC CGCGTCATTC TCATCAAACT TGCCGACCGT ACCCACAACA TGCGCACGCT GGGCTCACTT CGCCCGGACA AACGTCGCCG CATCGCCCGT GAAACACTCG AAATTTACAG CCCGCTGGCG CACCGTTTAG GTATCCACCA CATTAAAACC GAACTCGAAG AGCTGGGTTT TGAGGCGCTG TATCCCAACC GTTACCGCGT AATCAAAGAA GTGGTGAAAG CCGCACGCGG CAACCGTAAA GAGATGATCC AAAAAATCCT CTCTGAAATC GAAGGGCGTT TGCAGGAAGC GGGAATACCG TGCCGCGTCA GTGGTCGCGA GAAGCATCTT TATTCGATCT ACTGCAAAAT GGTGCTCAAA GAGCAGCGTT TTCACTCAAT CATGGACATC TACGCTTTCC GCGTGATCGT CAATGATTCC GACACCTGTT ATCGCGTGCT CGGGCAAATG CATAGCCTGT ACAAGCCGCG TCCGGGTCGC GTGAAAGACT ACATCGCCAT TCCAAAAGCG AACGGCTATC AGTCTTTGCA CACCTCGATG ATTGGCCCGC ACGGCGTGCC GGTTGAGGTC CAAATCCGTA CCGAAGATAT GGATCAGATG GCGGAGATGG GTGTTGCCGC GCACTGGGCT TATAAAGAGC ACGGCGAAAC CAGCACCACC GCGCAAATCC GCGCCCAGCG CTGGATGCAA AGCCTGCTGG AGCTGCAACA GAGTGCCGGT AGCTCGTTTG AATTTATCGA GAGCGTTAAA TCCGATCTCT TCCCGGATGA GATTTACGTT TTCACACCGG AAGGGCGCAT TGTCGAACTG CCTGCCGGTG CAACGCCCGT CGACTTCGCT TATGCGGTGC ATACCGATAT CGGTCATGCC TGCGTGGGCG CGCGTGTCGA CCGTCAGCCT TACCCGCTGT CGCAGCCGCT TACCAGCGGT CAAACCGTTG AAATCATTAC CGCACCGGGC GCTCGCCCGA ATGCCGCGTG GCTGAACTTT GTCGTCAGCT CGAAAGCGCG CGCCAAAATT CGTCAGTTGC TGAAAAACCT CAAGCGTGAT GATTCTGTAA GCCTGGGACG TCGTCTGCTC AACCATGCGT TGGGTGGTAG CCGTAAGCTC AATGAAATCC CGCAGGAAAA TATTCAGCGC GAGCTGGACC GCATGAAGCT GGCAACGCTT GACGATCTGC TGGCTGAAAT CGGCCTTGGT AACGCAATGA GCGTGGTGGT CGCGAAAAAT CTGCAACATG GGGACGCCTC CATTCCACCG GCAACCCAAA GTCACGGACA TCTGCCCATT AAAGGTGCCG ATGGCGTGCT GATCACCTTT GCGAAATGCT GCCGCCCTAT TCCTGGCGAC CCGATTATCG CCCACGTGAG CCCCGGTAAA GGTCTGGTGA TCCACCATGA ATCCTGCCGT AACATCCGTG GCTACCAGAA AGAGCCAGAG AAGTTTATGG CTGTGGAATG GGATAAAGAG ACGGCGCAGG AGTTCATCAC CGAAATCAAG GTGGAGATGT TCAATCATCA GGGCGCGCTG GCAAACCTGA CAGCGGCAAT TAACACCACG ACCTCGAATA TTCAAAGTTT GAATACGGAA GAGAAAGATG GTCGCGTCTA CAGCGCCTTT ATTCGTCTGA CCGCCCGTGA CCGTGTGCAT CTGGCGAATA TCATGCGCAA AATCCGCGTG ATGCCAGACG TGATTAAAGT CACCCGAAAC CGAAATTAA
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Protein sequence | MYLFESLNQL IQTYLPEDQI KRLRQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMK LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHIKT ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLQEAGIP CRVSGREKHL YSIYCKMVLK EQRFHSIMDI YAFRVIVNDS DTCYRVLGQM HSLYKPRPGR VKDYIAIPKA NGYQSLHTSM IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEHGETSTT AQIRAQRWMQ SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA CVGARVDRQP YPLSQPLTSG QTVEIITAPG ARPNAAWLNF VVSSKARAKI RQLLKNLKRD DSVSLGRRLL NHALGGSRKL NEIPQENIQR ELDRMKLATL DDLLAEIGLG NAMSVVVAKN LQHGDASIPP ATQSHGHLPI KGADGVLITF AKCCRPIPGD PIIAHVSPGK GLVIHHESCR NIRGYQKEPE KFMAVEWDKE TAQEFITEIK VEMFNHQGAL ANLTAAINTT TSNIQSLNTE EKDGRVYSAF IRLTARDRVH LANIMRKIRV MPDVIKVTRN RN
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