Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3941 |
Symbol | |
ID | 6145302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4020421 |
End bp | 4021197 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641618767 |
Product | DNA-binding transcriptional repressor LldR |
Protein accession | YP_001745906 |
Protein GI | 170682830 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTTT TACCCAGACG CCTGTCAGAC GAGGTTGCCG ATCGTGTGCG GGCGCTGATT GATGAAAAAA ACCTGGAAGC GGGCATGAAG TTGCCCGCTG AACGTCAACT GGCGATGCAA CTCGGCGTGT CGAGAAATTC ACTGCGCGAG GCGCTGGCGA AACTGGTAAG CGAAGGTGTG CTGCTCAGTC GACGTGGCGG CGGGACGTTT ATTCGCTGGC GTCATGACAC ATGGTCGGAG CAAAACATCG TCCAGCCGCT GAAAACGCTG ATGGCCGATG ATCCGGATTA CAGTTTCGAT ATTCTGGAAG CCCGCTACGC CATTGAAGCC AGCACCGCGT GGCATGCGGC AATGCGCGCC ACACCTGGCG ACAAAGAAAA GATTCAGCTT TGTTTTGAAG CAACGCTCAG CGAAGACCCG GACCTCGCTT CGCAAGCGGA CGTTCGTTTT CATCTGGCGA TTGCCGAAGC CTCGCATAAC ATCGTGCTGC TGCAAACCAT GCGCGGTTTC TTCGATGTCC TGCAATCCTC CGTGAAGCAT AGCCGCCAGC GGATGTATCT GGTACCCCCG GTTTTTTCAC AGCTGACCGA ACAACATCAG GCAGTCATTG ACGCCATTTT TGCCGGTGAT GCTGACGGGG CGCGTAAAGC AATGATGGCG CACCTTAGCT TTGTTCACAC CACCATGAAA CGATTCGATG AAGATCAAGC TCGCCATGCA CGCATTACCC GCCTGCCTGG TGACCATAAT GAGCATTCGA GGGAGAAAAA CGCATGA
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Protein sequence | MIVLPRRLSD EVADRVRALI DEKNLEAGMK LPAERQLAMQ LGVSRNSLRE ALAKLVSEGV LLSRRGGGTF IRWRHDTWSE QNIVQPLKTL MADDPDYSFD ILEARYAIEA STAWHAAMRA TPGDKEKIQL CFEATLSEDP DLASQADVRF HLAIAEASHN IVLLQTMRGF FDVLQSSVKH SRQRMYLVPP VFSQLTEQHQ AVIDAIFAGD ADGARKAMMA HLSFVHTTMK RFDEDQARHA RITRLPGDHN EHSREKNA
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