Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3940 |
Symbol | lldP |
ID | 6143557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4018766 |
End bp | 4020421 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641618766 |
Product | L-lactate permease |
Protein accession | YP_001745905 |
Protein GI | 170681119 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCT GGCAACAAAA CTACGATCCC GCCGGGAATA TCTGGCTTTC CAGCCTGATA GCATCGCTTC CCATCCTGTT TTTCTTCTTT GCGCTGATTA AGCTCAAACT GAAAGGATAC GTCGCCGCCT CATGGACGGT GGCAATCGCC CTTGCCGTGG CTTTGCTGTT CTATAAAATG CCGGTCGCTA ACGCGCTGGC CTCGGTGGTT TATGGCTTCT TCTACGGGTT GTGGCCCATC GCGTGGATCA TTATTGCAGC GGTGTTCGTC TATAAGATCT CGGTGAAAAC CGGGCAGTTT GACATCATCC GCTCGTCTAT TCTTTCGATA ACCCCTGACC AGCGCCTGCA AATGCTGATT GTCGGTTTCT GTTTCGGCGC TTTCCTTGAA GGAGCCGCAG GCTTTGGCGC ACCGGTAGCA ATTACCGCCG CATTGCTGGT CGGTCTGGGC TTTAAACCAC TCTACGCCGC CGGACTGTGC CTGATTGTTA ACACCGCACC AGTGGCATTT GGCGCGATGG GTATTCCGAT TCTGGTCGCC GGGCAGGTAA CAGGCATCGA CAGCTTTGAG ATTGGTCAGA TGGTGGGGCG TCAGCTGCCG TTTATGACCA TTATCGTGCT GTTCTGGATC ATGGCGATTA TGGACGGTTG GCGCGGTATC AAAGAGACGT GGCCTGCGGT CGTGGTTGCA GGTGGTTCGT TTGCCATTGC TCAATACCTC AGCTCTAACT TCATTGGGCC GGAACTGCCA GACATTATCT CTTCGCTGGT ATCACTGCTC TGCCTGACGC TGTTCCTCAA ACGCTGGCAA CCAGTGCGCG TATTCCGCTT CGGTGACTTA GGGGCGTCAC AGGTTGATAT GACGCTGGCT CACACAGGTT ACACGGCAGG TCAGGTGCTG CGCGCCTGGA CACCGTTCCT GTTCCTGACC GCCACCGTAA CGCTGTGGAG TATCCCGCCG TTTAAAGCCC TGTTCGCTTC AGGCGGTGCG CTGTATGAGT GGGTGATCAA CATTCCGGTG CCGTACCTCG ATAAACTGGT TGCCCGTATG CCGCCAGTGG TCAGCGAAGC GACAGCGTAT GCCGCCGTGT TTAAGTTTGA CTGGTTCTCT GCCACCGGTA CCGCCATTCT GTTTGCTGCC CTGCTCTCGA TTGTCTGGCT GAAGATGAAA CCATCTGACG CTATCAGCAC CTTCGGCAGC ACGCTGAAAG AACTGGCTCT GCCCATCTAC TCCATCGGTA TGGTGCTGGC ATTCGCCTTT ATCTCGAACT ATTCCGGTTT GTCATCAACA CTGGCGCTGG CACTGGCGCA CACCGGTCAT GCATTCACCT TCTTCTCGCC GTTCCTCGGC TGGCTTGGGG TATTCCTGAC CGGGTCGGAT ACGTCATCTA ATGCTTTGTT TGCCGCTTTG CAGGCTACCG CCGCACAACA AATTGGCGTT TCTGACCTGT TGTTGGTTGC CGCCAATACC ACCGGTGGCG TCACCGGTAA GATGATCTCC CCGCAATCTA TCGCTATCGC CTGTGCGGCG GTAGGCCTGG TGGGCAAAGA GTCTGATTTG TTCCGCTTTA CTGTCAAACA CAGCCTGATC TTCACCTGTA TGGTGGGCGT GATCACCACG CTTCAGGCCT ATGTCTTAAC GTGGATGATT CCTTAA
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Protein sequence | MNLWQQNYDP AGNIWLSSLI ASLPILFFFF ALIKLKLKGY VAASWTVAIA LAVALLFYKM PVANALASVV YGFFYGLWPI AWIIIAAVFV YKISVKTGQF DIIRSSILSI TPDQRLQMLI VGFCFGAFLE GAAGFGAPVA ITAALLVGLG FKPLYAAGLC LIVNTAPVAF GAMGIPILVA GQVTGIDSFE IGQMVGRQLP FMTIIVLFWI MAIMDGWRGI KETWPAVVVA GGSFAIAQYL SSNFIGPELP DIISSLVSLL CLTLFLKRWQ PVRVFRFGDL GASQVDMTLA HTGYTAGQVL RAWTPFLFLT ATVTLWSIPP FKALFASGGA LYEWVINIPV PYLDKLVARM PPVVSEATAY AAVFKFDWFS ATGTAILFAA LLSIVWLKMK PSDAISTFGS TLKELALPIY SIGMVLAFAF ISNYSGLSST LALALAHTGH AFTFFSPFLG WLGVFLTGSD TSSNALFAAL QATAAQQIGV SDLLLVAANT TGGVTGKMIS PQSIAIACAA VGLVGKESDL FRFTVKHSLI FTCMVGVITT LQAYVLTWMI P
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