Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3932 |
Symbol | mtlA |
ID | 6143302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4007925 |
End bp | 4009838 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618758 |
Product | PTS system, mannitol-specific IIABC component |
Protein accession | YP_001745897 |
Protein GI | 170683486 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.754882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCG ATATTAAGAT CAAAGTGCAA AGCTTTGGTC GTTTCCTCAG CAACATGGTG ATGCCAAATA TCGGCGCGTT TATCGCGTGG GGTATCATCA CCGCGTTATT TATTCCAACA GGGTGGTTAC CGAACGAAAC GCTGGCGAAG CTGGTCGGGC CGATGATCAC TTATCTCCTG CCACTGCTGA TCGGTTATAC CGGTGGTAAG CTGGTAGGCG GCGAACGTGG CGGCGTAGTC GGTGCCATTA CCACCATGGG CGTTATCGTC GGCGCAGACA TGCCGATGTT CCTCGGTTCT ATGATTGCAG GTCCGCTGGG CGGCTGGTGC ATTAAGCACT TCGACCGCTG GGTAGACGGT AAGATCAAAT CCGGTTTTGA AATGCTGGTG AATAACTTCT CCGCTGGTAT CATCGGGATG ATCCTCGCTA TTCTGGCATT TCTCGGCATT GGCCCGGTTG TTGAAGCCCT GTCTAAAATG CTGGCGGCGG GCGTTAACTT CATGGTTGTC CATGACATGC TGCCGCTGGC GTCTATCTTT GTTGAACCGG CGAAAATCCT GTTCCTCAAC AACGCCATTA ACCACGGTAT CTTCTCGCCG CTGGGTATTC AGCAGTCCCA TGAACTGGGT AAATCCATCT TCTTCCTGAT TGAAGCTAAC CCAGGTCCGG GTATGGGCGT GCTGCTGGCG TACATGTTCT TTGGTCGTGG TAGCGCTAAA CAGTCTGCGG GCGGTGCGGC AATCATCCAC TTCCTGGGGG GTATCCACGA AATCTACTTC CCGTATGTGC TGATGAATCC GCGTCTGATT CTGGCCGTTA TCCTCGGCGG TATGACTGGC GTATTCACGC TGACTATCCT GGGCGGTGGG CTGGTTTCTC CGGCATCTCC GGGTTCTATC CTTGCTGTAC TGGCGATGAC GCCAAAAGGT GCTTACTTCG CTAACATCGC GGGTGTGTGT GCGGCAATGG CAGTCTCCTT CGTTGTCTCT GCCATTCTGC TGAAAACCAG CAAAGTGAAA GAAGAAGATG ATATTGAAGC AGCAACTCGT CGTATGCAGG ACATGAAAGC TGAGTCTAAA GGTGCGTCTC CGCTGTCTGC GGGCGATGTG ACTAACGACC TGAGCCACGT ACGTAAAATC ATCGTTGCCT GTGACGCAGG TATGGGTTCC AGTGCGATGG GCGCAGGTGT GCTGCGTAAG AAAATTCAGG ATGCAGGTCT GTCGCAGATT TCGGTCACTA ACAGCGCGAT CAACAACCTG CCGCCAGATG TGGACCTCGT CATCACTCAC CGTGACCTGA CCGAACGCGC TATGCGCCAG GTTCCACAGG CACAGCATAT TTCGCTGACC AACTTCCTCG ACAGCGGCCT GTACACCAGC CTGACCGAAC GTCTGGTTGC TGCCCAGCGC CATACTGAAA ACGAAGTAAA AGTGAAAGAC AGTCTGAAAG ACAGCTTTGA CGATTCCAGT GCTAACCTGT TCAAGCTAGG CGCGGAGAAC ATCTTCCTCG GTCGCAAAGC GGCCACCAAA GAAGAAGCGA TTCGTTTTGC TGGCGAGCAG CTGGTGAAAG GCGGTTACGT TGAGCCGGAA TACGTTCAGG CGATGCTGGA TCGTGAAAAA CTGACCCCGA CTTATCTGGG TGAGTCTATC GCGGTGCCAC ACGGTACGGT TGAAGCAAAA GATCGCGTAC TGAAAACGGG CGTGGTGTTC TGCCAGTACC CGGAAGGCGT GCGCTTCGGT GAAGAAGAAG ATGACATTGC CCGTCTGGTG ATTGGTATTG CTGCCCGTAA CAACGAGCAC ATTCAGGTTA TCACCAGCCT GACCAATGCA CTGGATGATG AGACTGTCAT CGAGCGTCTG GCACACACCA CCAGCGTGGA TGAAGTGCTG GAATTGCTGG CAGGTCGTAA GTAA
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Protein sequence | MSSDIKIKVQ SFGRFLSNMV MPNIGAFIAW GIITALFIPT GWLPNETLAK LVGPMITYLL PLLIGYTGGK LVGGERGGVV GAITTMGVIV GADMPMFLGS MIAGPLGGWC IKHFDRWVDG KIKSGFEMLV NNFSAGIIGM ILAILAFLGI GPVVEALSKM LAAGVNFMVV HDMLPLASIF VEPAKILFLN NAINHGIFSP LGIQQSHELG KSIFFLIEAN PGPGMGVLLA YMFFGRGSAK QSAGGAAIIH FLGGIHEIYF PYVLMNPRLI LAVILGGMTG VFTLTILGGG LVSPASPGSI LAVLAMTPKG AYFANIAGVC AAMAVSFVVS AILLKTSKVK EEDDIEAATR RMQDMKAESK GASPLSAGDV TNDLSHVRKI IVACDAGMGS SAMGAGVLRK KIQDAGLSQI SVTNSAINNL PPDVDLVITH RDLTERAMRQ VPQAQHISLT NFLDSGLYTS LTERLVAAQR HTENEVKVKD SLKDSFDDSS ANLFKLGAEN IFLGRKAATK EEAIRFAGEQ LVKGGYVEPE YVQAMLDREK LTPTYLGESI AVPHGTVEAK DRVLKTGVVF CQYPEGVRFG EEEDDIARLV IGIAARNNEH IQVITSLTNA LDDETVIERL AHTTSVDEVL ELLAGRK
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