Gene EcSMS35_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3932 
SymbolmtlA 
ID6143302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4007925 
End bp4009838 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content54% 
IMG OID641618758 
ProductPTS system, mannitol-specific IIABC component 
Protein accessionYP_001745897 
Protein GI170683486 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.754882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCG ATATTAAGAT CAAAGTGCAA AGCTTTGGTC GTTTCCTCAG CAACATGGTG 
ATGCCAAATA TCGGCGCGTT TATCGCGTGG GGTATCATCA CCGCGTTATT TATTCCAACA
GGGTGGTTAC CGAACGAAAC GCTGGCGAAG CTGGTCGGGC CGATGATCAC TTATCTCCTG
CCACTGCTGA TCGGTTATAC CGGTGGTAAG CTGGTAGGCG GCGAACGTGG CGGCGTAGTC
GGTGCCATTA CCACCATGGG CGTTATCGTC GGCGCAGACA TGCCGATGTT CCTCGGTTCT
ATGATTGCAG GTCCGCTGGG CGGCTGGTGC ATTAAGCACT TCGACCGCTG GGTAGACGGT
AAGATCAAAT CCGGTTTTGA AATGCTGGTG AATAACTTCT CCGCTGGTAT CATCGGGATG
ATCCTCGCTA TTCTGGCATT TCTCGGCATT GGCCCGGTTG TTGAAGCCCT GTCTAAAATG
CTGGCGGCGG GCGTTAACTT CATGGTTGTC CATGACATGC TGCCGCTGGC GTCTATCTTT
GTTGAACCGG CGAAAATCCT GTTCCTCAAC AACGCCATTA ACCACGGTAT CTTCTCGCCG
CTGGGTATTC AGCAGTCCCA TGAACTGGGT AAATCCATCT TCTTCCTGAT TGAAGCTAAC
CCAGGTCCGG GTATGGGCGT GCTGCTGGCG TACATGTTCT TTGGTCGTGG TAGCGCTAAA
CAGTCTGCGG GCGGTGCGGC AATCATCCAC TTCCTGGGGG GTATCCACGA AATCTACTTC
CCGTATGTGC TGATGAATCC GCGTCTGATT CTGGCCGTTA TCCTCGGCGG TATGACTGGC
GTATTCACGC TGACTATCCT GGGCGGTGGG CTGGTTTCTC CGGCATCTCC GGGTTCTATC
CTTGCTGTAC TGGCGATGAC GCCAAAAGGT GCTTACTTCG CTAACATCGC GGGTGTGTGT
GCGGCAATGG CAGTCTCCTT CGTTGTCTCT GCCATTCTGC TGAAAACCAG CAAAGTGAAA
GAAGAAGATG ATATTGAAGC AGCAACTCGT CGTATGCAGG ACATGAAAGC TGAGTCTAAA
GGTGCGTCTC CGCTGTCTGC GGGCGATGTG ACTAACGACC TGAGCCACGT ACGTAAAATC
ATCGTTGCCT GTGACGCAGG TATGGGTTCC AGTGCGATGG GCGCAGGTGT GCTGCGTAAG
AAAATTCAGG ATGCAGGTCT GTCGCAGATT TCGGTCACTA ACAGCGCGAT CAACAACCTG
CCGCCAGATG TGGACCTCGT CATCACTCAC CGTGACCTGA CCGAACGCGC TATGCGCCAG
GTTCCACAGG CACAGCATAT TTCGCTGACC AACTTCCTCG ACAGCGGCCT GTACACCAGC
CTGACCGAAC GTCTGGTTGC TGCCCAGCGC CATACTGAAA ACGAAGTAAA AGTGAAAGAC
AGTCTGAAAG ACAGCTTTGA CGATTCCAGT GCTAACCTGT TCAAGCTAGG CGCGGAGAAC
ATCTTCCTCG GTCGCAAAGC GGCCACCAAA GAAGAAGCGA TTCGTTTTGC TGGCGAGCAG
CTGGTGAAAG GCGGTTACGT TGAGCCGGAA TACGTTCAGG CGATGCTGGA TCGTGAAAAA
CTGACCCCGA CTTATCTGGG TGAGTCTATC GCGGTGCCAC ACGGTACGGT TGAAGCAAAA
GATCGCGTAC TGAAAACGGG CGTGGTGTTC TGCCAGTACC CGGAAGGCGT GCGCTTCGGT
GAAGAAGAAG ATGACATTGC CCGTCTGGTG ATTGGTATTG CTGCCCGTAA CAACGAGCAC
ATTCAGGTTA TCACCAGCCT GACCAATGCA CTGGATGATG AGACTGTCAT CGAGCGTCTG
GCACACACCA CCAGCGTGGA TGAAGTGCTG GAATTGCTGG CAGGTCGTAA GTAA
 
Protein sequence
MSSDIKIKVQ SFGRFLSNMV MPNIGAFIAW GIITALFIPT GWLPNETLAK LVGPMITYLL 
PLLIGYTGGK LVGGERGGVV GAITTMGVIV GADMPMFLGS MIAGPLGGWC IKHFDRWVDG
KIKSGFEMLV NNFSAGIIGM ILAILAFLGI GPVVEALSKM LAAGVNFMVV HDMLPLASIF
VEPAKILFLN NAINHGIFSP LGIQQSHELG KSIFFLIEAN PGPGMGVLLA YMFFGRGSAK
QSAGGAAIIH FLGGIHEIYF PYVLMNPRLI LAVILGGMTG VFTLTILGGG LVSPASPGSI
LAVLAMTPKG AYFANIAGVC AAMAVSFVVS AILLKTSKVK EEDDIEAATR RMQDMKAESK
GASPLSAGDV TNDLSHVRKI IVACDAGMGS SAMGAGVLRK KIQDAGLSQI SVTNSAINNL
PPDVDLVITH RDLTERAMRQ VPQAQHISLT NFLDSGLYTS LTERLVAAQR HTENEVKVKD
SLKDSFDDSS ANLFKLGAEN IFLGRKAATK EEAIRFAGEQ LVKGGYVEPE YVQAMLDREK
LTPTYLGESI AVPHGTVEAK DRVLKTGVVF CQYPEGVRFG EEEDDIARLV IGIAARNNEH
IQVITSLTNA LDDETVIERL AHTTSVDEVL ELLAGRK