Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3911 |
Symbol | |
ID | 6146208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3983271 |
End bp | 3984407 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641618738 |
Product | membrane fusion protein family protein |
Protein accession | YP_001745877 |
Protein GI | 170680467 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAC TGATTATTTT AACCTATGTG GCTTTCGCAT GGGCAATGTT TAAGATCTTT AAAATTCCTG TAAATAAATG GACCATTCCC ACAGCGGCCC TGGGAGGCAT ATTTATTGTC AGCGGTCTAA TTCTGTTAAT GAACTATAAC CATCCGTATA CCTTTAAAGC GCAAAAAGCG GTTATTTCTA TTCCTGTTGT CCCACAGGTG ACAGGCGTGG TGATCGAAGT GACGGACAAG AAAAATACGC TGATTAAAAA AGGTGAGGTG CTATTTCGAC TGGACCCGAC GCGTTATCAG GCGCGGGTGG ATCGGCTGAT GGCGGATATC GTTACCGCAG AACATAAACA GCGGGCGTTG GGCGCAGAGT TAGATGAGAT GGCGGCGAAT ACTCAGCAGG CAAAGGCCAC GCGGGATAAA TTCGCTAAAG AGTATCAGCG TTACGCACGC GGCAGTCAGG CGAAAGTAAA CCCGTTTTCA GAACGCGATA TCGATGTGGC GCGGCAAAAT TATCTGGCGC AGGAAGCCTC CGTGAAGTCA TCGGCGGCGG AACAAAAACA GATCCTGAGC CAGCTGGATA GCCTGGTGTT GGGTGAACAT TCTCAAATCG CCAGCCTGAA AGCGCAGCTC GCGGAAGCAA AATATAACCT TGAGCAGACG ATAGTGCGTG CGCCGAGCGA TGGTTATGTG ACCCAGGTAC TGATTCGTCC GGGTACCTAT GCCGCGTCGC TGCCGCTACG TCCGGTGATG GTGTTTATAC CCGATCAGAA ACGACAAATC GTGGCGCAGT TCCGTCAGAA CTCCTTGCTG CGACTGGCTC CTGGCGACGA TGCGGAAGTG GTGTTTAATG CTCTGCCAGG TAAGGTATTC AGCGGTAAGC TGGCAGCCAT TAGTCCAGCC GTTCCCGGCG GAGCTTATCA GTCGACCGGC ACCTTACAGA CGTTAAACAC AGCGCCGGGT TCAGATGGCG TTATCGCGAC CATTGAACTG GATGAGCATA CTGATTTGAG CGCATTACCA GACGGTATTT ACGCCCAGGT GGCGGTCTAC TCTGATCATT TCAGCCATGT CTCGGTGATG CGCAAAGTAC TGTTACGCAT GACCAGCTGG GTGCATTACC TTTATCTCGA TCATTAA
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Protein sequence | MDLLIILTYV AFAWAMFKIF KIPVNKWTIP TAALGGIFIV SGLILLMNYN HPYTFKAQKA VISIPVVPQV TGVVIEVTDK KNTLIKKGEV LFRLDPTRYQ ARVDRLMADI VTAEHKQRAL GAELDEMAAN TQQAKATRDK FAKEYQRYAR GSQAKVNPFS ERDIDVARQN YLAQEASVKS SAAEQKQILS QLDSLVLGEH SQIASLKAQL AEAKYNLEQT IVRAPSDGYV TQVLIRPGTY AASLPLRPVM VFIPDQKRQI VAQFRQNSLL RLAPGDDAEV VFNALPGKVF SGKLAAISPA VPGGAYQSTG TLQTLNTAPG SDGVIATIEL DEHTDLSALP DGIYAQVAVY SDHFSHVSVM RKVLLRMTSW VHYLYLDH
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