Gene EcSMS35_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3872 
Symbol 
ID6146902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3939800 
End bp3940240 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content52% 
IMG OID641618697 
Producthypothetical protein 
Protein accessionYP_001745836 
Protein GI170681336 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGGG AAGCGCAACG TTCAGAACTC CCCGCGATCC TCGAACTGTG GCTGGAAAGT 
ACAACCTGGG GGCATCCCTT TATAAAAGCG AATTACTGGC GTGATTGCAT TCCGCTGGTG
CGGGATGCCT ATCTTGCCAA CGCGCAAAAC TGGGTCTGGG AAGAAGACGG TAAGCTTCTC
GGTTTTGTCA GCATTATGGA AGGCCGGTTT CTGGCTGCAA TGTTTGTCGC ACCGAAGGCC
GTCAGACGCG GTATTGGTAA GGCGCTAATG CAGTATGTGC AGCAGCGCCA TCCCCATCTG
ATGCTGGAGG TTTATCAAAA AAATCAACCG GCGATAGATT TTTACCATGC GCAGGGTTTT
CACATTGTCG ACTGCGCATG GCAAGATGAA ACCCAACTAC CCACCTGGAT TATGAGCTGG
CCGGTGGTTC AAACGCTGTA A
 
Protein sequence
MIREAQRSEL PAILELWLES TTWGHPFIKA NYWRDCIPLV RDAYLANAQN WVWEEDGKLL 
GFVSIMEGRF LAAMFVAPKA VRRGIGKALM QYVQQRHPHL MLEVYQKNQP AIDFYHAQGF
HIVDCAWQDE TQLPTWIMSW PVVQTL