| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3860 |
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| Symbol | dppD |
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| ID | 6144962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3929337 |
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| End bp | 3930320 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618686 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001745826 |
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| Protein GI | 170682826 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAT TAAATGTAGA TAAATTATCG GTGCATTTCG GCGACGAAAG CGCACCGTTC
CGCGCCGTAG ACCGCATCAG CTACAGCGTA AAACAGGGCG AAGTAGTCGG GATTGTGGGT
GAGTCCGGCT CTGGTAAATC GGTCAGTTCG CTGGCGATTA TGGGGCTGAT TGATTATCCG
GGCCGCGTAA TGGCGGAAAA GCTGGAGTTT AACGGTCAGG ATTTACAGCG TATCTCAGAA
AAAGAGCGCC GCAACCTGGT GGGTGCCGAA GTGGCGATGA TCTTCCAGGA CCCGATGACC
AGCCTTAACC CGTGCTACAC CGTGGGTTTC CAGATTATGG AAGCGATTAA GGTGCATCAG
GGCGGCAACA AAAGTACCCG CCGTCAGCGG GCGATTGACC TGCTGAATCA GGTCGGTATT
CCCGATCCGG CATCGCGTCT GGATGTTTAC CCGCATCAGC TTTCCGGCGG CATGAGCCAG
CGCGTGATGA TCGCCATGGC GATTGCCTGT CGGCCAAAAC TGCTGATTGC CGATGAACCA
ACCACTGCGC TGGACGTGAC CATTCAGGCG CAAATCATTG AACTACTGCT GGAGCTACAG
CAGAAAGAGA ACATGGCGCT GGTGTTAATT ACCCATGACC TGGCGCTGGT GGCGGAAGCG
GCACATAAAA TCATCGTGAT GTATGCAGGT CAGGTGGTGG AAACGGGCGA TGCGCACGCC
ATCTTCCATG CGCCGCGTCA CCCGTATACT CAGGCATTGC TGCGTGCGCT GCCGGAATTT
GCTCAGGATA AAGAACGTCT GGCGTCGTTG CCAGGTGTTG TTCCCGGCAA GTATGACCGT
CCGAACGGCT GCCTGCTTAA CCCGCGCTGT CCCTACGCCA CTGACAAATG CCGCGCTGAA
GAACCGGCGC TGAATATGCT CGCTGACGGG CGTCAGTCCA AATGCCACTA CCCACTTGAT
GATGCCGGGA GGCCGACACT ATGA
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| Protein sequence | MALLNVDKLS VHFGDESAPF RAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP
GRVMAEKLEF NGQDLQRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ
GGNKSTRRQR AIDLLNQVGI PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP
TTALDVTIQA QIIELLLELQ QKENMALVLI THDLALVAEA AHKIIVMYAG QVVETGDAHA
IFHAPRHPYT QALLRALPEF AQDKERLASL PGVVPGKYDR PNGCLLNPRC PYATDKCRAE
EPALNMLADG RQSKCHYPLD DAGRPTL
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