Gene EcSMS35_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3840 
SymbolbcsZ 
ID6144897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3913693 
End bp3914805 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content54% 
IMG OID641618666 
Productendo-1,4-D-glucanase 
Protein accessionYP_001745806 
Protein GI170683128 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.634821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATGA ATGTGTTGCG TAGTGGACTC GTGACGATGC TGCTGCTGGC TGCCTTTAGT 
GTTCAGGCAG CCTGCAACTG GCCTGCCTGG GAGCAATTCA AAAAGGATTA CATCAGTCAG
GAAGGGCGCG TCATTGACCC AAGTGACGCG CGTAAAATCA CCACTTCCGA AGGGCAAAGT
TACGGCATGT TCTTTGCCCT GGCGGCTAAC GACCGTGCAG CTTTCGATAA TATTCTCGAC
TGGACGCAGA ACAATCTCGC TCAGGGTTCT TTAAAAGAAC GTTTGCCCGC ATGGCTGTGG
GGCAAGAAAG AGAACAGTAA GTGGGAAGTG CTGGACAGCA ATTCGGCCTC CGATGGTGAT
GTCTGGATGG CCTGGTCGTT GCTGGAGGCG GGGCGTTTGT GGAAAGAGCA GCGTTATACC
GACATCGGCA GCGCGTTGTT AAAACGTATT GCGCGGGAGG AAGTGGTGAC GGTGCCTGGG
CTGGGTTCCA TGTTGTTGCC GGGCAAAGTG GGATTTGCAG AGGATAACAG CTGGCGTTTT
AACCCCAGCT ACCTGCCGCC GACGCTGGCG CAGTATTTCA CCCGCTTTGG CGCGCCGTGG
ACTACGCTGC GCGAAACCAA TCAACGTTTA TTGCTGGAAA CCGCCCCGAA AGGCTTTTCG
CCAGACTGGG TGCGCTATGA GAAAGACAAA GGCTGGCAGC TAAAAGCCGA AAAAACATTG
ATCAGCAGCT ACGACGCGAT CCGCGTTTAC ATGTGGGTAG GCATGATGCC TGACAGCGAT
CCGCAAAAAG CGCGGATGCT CAACCGGTTT AAACCGATGG CGACATTCAC CGAGAAAAAC
GGTTATCCGC CGGAAAAAGT GGATGTGGCT ACGGGGAAAG CACAGGGTAA AGGACCGGTC
GGTTTTTCTG CCGCCATGCT GCCCTTTTTA CAAAACCGCG ATGCGCAGGC CGTTCAGCGC
CAGCGCGTGG CCGATAACTT TCCCGGCAGC GATGCCTATT ACAACTATGT GCTGACCCTG
TTTGGACAAG GCTGGGATCA ACACCGTTTC CGCTTCTCGA CAAAAGGTGA GTTATTACCT
GACTGGGGCC AGGAATGCGC AAATTCACAC TAA
 
Protein sequence
MKMNVLRSGL VTMLLLAAFS VQAACNWPAW EQFKKDYISQ EGRVIDPSDA RKITTSEGQS 
YGMFFALAAN DRAAFDNILD WTQNNLAQGS LKERLPAWLW GKKENSKWEV LDSNSASDGD
VWMAWSLLEA GRLWKEQRYT DIGSALLKRI AREEVVTVPG LGSMLLPGKV GFAEDNSWRF
NPSYLPPTLA QYFTRFGAPW TTLRETNQRL LLETAPKGFS PDWVRYEKDK GWQLKAEKTL
ISSYDAIRVY MWVGMMPDSD PQKARMLNRF KPMATFTEKN GYPPEKVDVA TGKAQGKGPV
GFSAAMLPFL QNRDAQAVQR QRVADNFPGS DAYYNYVLTL FGQGWDQHRF RFSTKGELLP
DWGQECANSH