| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3826 |
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| Symbol | |
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| ID | 6146684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3893999 |
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| End bp | 3895012 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618652 |
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| Product | putative ribonuclease |
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| Protein accession | YP_001745792 |
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| Protein GI | 170681590 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.135959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG AAAACGAGAT CAAACGTCCC ACCCAGGATC TGGAGCACGA GCCGATTAAG
CAGTTGGATA ATAGCGAGAA AGGCGGCAAA GTTAGCCAGG CGCTGGAAAC CGTCACCACT
ACTGCCGAGA AAGTCCAACG CCAACCGGTT ATTGCGCACC TGATTCGCGC GACAGAACGC
TTTAACGATC GGCTGGGTAA CCAGTTTGGT GCGGCTATCA CCTATTTCTC ATTTTTGTCG
ATGATCCCGA TTTTGATGGT GTCGTTTGCC GCAGGGGGCT TTGTGCTGGC CTCCCATCCG
ATGTTGCTAC AGGATATCTT CGACAAAATT CTGCAAAACA TCAGCGATCC GACGCTAGCC
GCCACGTTGA AAAACACCAT CAACACCGCC GTTCAGCAGC GTACGACTGT AGGGCTTGTC
GGCCTGGCGG TGGCACTTTA TTCCGGCATC AACTGGATGG GTAACCTGCG TGAAGCGATT
CGTGCCCAGT CGCGCGATGT CTGGGAACGC TCGCCGCAAG ATCAGGAGAA GTTCTGGGTA
AAATATCTGC GTGATTTTAT TTCGCTGATT GGTTTGTTGA TTGCGCTGAT TGTGACGCTT
TCTATCACCT CGGTTGCCGG TTCTGCGCAG CAAATGATTA TTAGCGCCCT GCACCTGAAC
AGCATTGAGT GGCTGAAACC GACGTGGCGG TTGATTGGCC TGGCGATTTC CATCTTCGCC
AACTATCTGC TTTTCTTCTG GATCTTCTGG CGGTTACCGC GCCACCGTCC GCGCAAAAAA
GCCCTGATTC GCGGAACATT TCTGGCTGCT ATTGGTTTTG AAGTGATTAA AATTGTGATG
ACTTACACCC TGCCATCGCT GATGAAATCC CCCTCTGGCG CAGCATTTGG TTCCGTGCTG
GGGCTGATGG CATTTTTCTA CTTCTTCGCC CGTTTGACGC TGTTTTGCGC GGCGTGGATT
GCCACCGCCG AATATAAAGA CGACCCGCGA ATGCCGGGGA AAACGCAGCG GTAA
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| Protein sequence | MTQENEIKRP TQDLEHEPIK QLDNSEKGGK VSQALETVTT TAEKVQRQPV IAHLIRATER
FNDRLGNQFG AAITYFSFLS MIPILMVSFA AGGFVLASHP MLLQDIFDKI LQNISDPTLA
ATLKNTINTA VQQRTTVGLV GLAVALYSGI NWMGNLREAI RAQSRDVWER SPQDQEKFWV
KYLRDFISLI GLLIALIVTL SITSVAGSAQ QMIISALHLN SIEWLKPTWR LIGLAISIFA
NYLLFFWIFW RLPRHRPRKK ALIRGTFLAA IGFEVIKIVM TYTLPSLMKS PSGAAFGSVL
GLMAFFYFFA RLTLFCAAWI ATAEYKDDPR MPGKTQR
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