| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3825 |
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| Symbol | |
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| ID | 6147080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3892979 |
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| End bp | 3893950 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618651 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001745791 |
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| Protein GI | 170682485 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.18343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAA AAACAATAAA CAATGCGATA TGCGCGCTAC TGTTTCGCTG TGAACAACAA
TCGGTCAAAG AAATGGATAA AATTCACGCA ATGCAGTTGT TCATCAAAGT CGCTGAGCTG
GAAAGTTTTT CCCGCGCAGC GGATTTCTTT GCTTTGCCAA AGGGAAGTGT TTCGCGCCAG
ATACAGGCAC TGGAACATCA ACTTGGCACC CAGCTTCTCC AGCGCACCAC GCGGCGGGTC
AAACTCACGC CAGAAGGCAT GACCTATTAT CAACGGGCAA AAGATGTGTT GAGTAATCTC
AACGAACTGG ACGGTCTGTT TCAACAGGAT GCCACCAGTA TCAGCGGTAA ATTACGCATC
GACATCCCGC CAGGAATCGC GAAAAGCCTG TTACTGCCGC GCCTGTCGGA ATTTCTCTAT
CTGCATCCGG GAATTGAGCT GGAGCTGAGT AGCCATGACC GTCCGGTAGA TATTCTTCAC
GATGGTTTTG ATTGCGTGAT ACGCACTGGC GCATTACCGG AAGATGGCGT TATCGCCCGT
CCCCTCGGCA AACTGACCGT GGTCAATTGT GCCAGTCCAC ACTATCTGAC GCGCTTTGGT
TATCCTCAAA GCCCCGACGA TCTGACTTCG CACGCTATAG TGCGTTACAC ACCGCACCTG
GGTGTACATC CGTTAGGTTT TGAGGTTGCC AGCGTTAATG GCGTCCAGTG GTTTAAGTCT
GGCGGCATGT TGACGGTAAA CAGTCGCGAA AACTATCTCG CCGCCGGTCT TGCCGGTCTG
GGGATTATTC AGATCCCGCG CATTGCCGTG CGCGAAGCCC TGCGTGCCGG GCGGCTTATT
GAAGTGTTGC CTGGCTACCG TGCCGAGCCG CTGTCCCTTT CACTGGTTTA TCCGCAGCGT
CGGGAGCTTT CCCGGCGTGT AAACCTGTTT ATGCAGTGGC TGGCTGGCGT AATGAAAGAG
TACCTGGACT GA
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| Protein sequence | MLEKTINNAI CALLFRCEQQ SVKEMDKIHA MQLFIKVAEL ESFSRAADFF ALPKGSVSRQ
IQALEHQLGT QLLQRTTRRV KLTPEGMTYY QRAKDVLSNL NELDGLFQQD ATSISGKLRI
DIPPGIAKSL LLPRLSEFLY LHPGIELELS SHDRPVDILH DGFDCVIRTG ALPEDGVIAR
PLGKLTVVNC ASPHYLTRFG YPQSPDDLTS HAIVRYTPHL GVHPLGFEVA SVNGVQWFKS
GGMLTVNSRE NYLAAGLAGL GIIQIPRIAV REALRAGRLI EVLPGYRAEP LSLSLVYPQR
RELSRRVNLF MQWLAGVMKE YLD
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