| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3797 |
|---|
| Symbol | |
|---|
| ID | 6143192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3862537 |
|---|
| End bp | 3863538 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641618623 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001745763 |
|---|
| Protein GI | 170679968 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.236031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTT GGCTTGCGAT GCTGCAAGAT GCCGCAGAGA TGTTTGTGTT TCTCGCCGTC
GAGCTTTCTT TGCTGTTTAT AGTGATTAGT GCCGGTGTCA GCCTGATAAG ACAAAAGGTG
CCAGACCATA AAATCCAGCA GATGATGGGG GCCAGAAAAG GGAGAGGTTA TCTCCTGGCT
GCTCTGTTGG GAGCCGTTAC CCCGTTCTGT AGTTGCTCGA CAATCCCCAT GTTACGTGGA
TTGTTATCAG CGAAAGCCGG GTTTGGTCCG ACCCTCACTT TTTTATTTGT TTCCCCATTA
CTTAATCCCA TTATCGTCGG GTTAATGTGG GTGACCTTTG GCTGGAAAGT TACCTTGTTG
TACGCGATTA TCGCCGCCGG CGTCTCCGTA CTTGCCAGTA TTATCCTGGA TTCCCTGGGA
TTTGAACGTC ATATCATTGC CAGTAAAAGC TCATCAGCAA ATTGTTGTGC TCCAGCCAAA
ACTTCGCCGG GGACGACATA TACGCCAATA GAAGTGAGTT GCTGTAGTCC AACGGCTAAA
GCCATTGAGA AACCCGTAGT TAACTGTTGC AATACCAAAG CTGTGGTAAG TATTAATCCC
ATAAAACTAG CCACCAAAGA TGCGTTGCAA CAGTTTAAAG ATGTACTGCC ATATCTTTTG
TTAGGGGTAT TAATAGGCTC TTTTATTTAT GGCTTTATTC CCTCAGAGTG GATTGCCGCT
CATGCAGGGG CAGATAATCC CTTCGCCATC CCATTGAGCG CCGTTGTTGG TATTCCGCTA
TATATCCGGG CAGAGGCAGT TATCCCTCTG GCATCTGTTT TGATGACAAA AGGAATGGGT
CTGGGAGCAT TAATGGCATT AATCATCGGC AGTGCCGGCG CAAGCCTGAC GGAAGTGATA
TTACTTAAAT CAATGTTCAG AATACCGATG ATAGTTGCAT TCCTGACGGT TATATTAGGT
ATGGCTATCT TGATGGGCTA TTTGACTCAA ATGCTATTTT AA
|
|---|
| Protein sequence | MSSWLAMLQD AAEMFVFLAV ELSLLFIVIS AGVSLIRQKV PDHKIQQMMG ARKGRGYLLA
ALLGAVTPFC SCSTIPMLRG LLSAKAGFGP TLTFLFVSPL LNPIIVGLMW VTFGWKVTLL
YAIIAAGVSV LASIILDSLG FERHIIASKS SSANCCAPAK TSPGTTYTPI EVSCCSPTAK
AIEKPVVNCC NTKAVVSINP IKLATKDALQ QFKDVLPYLL LGVLIGSFIY GFIPSEWIAA
HAGADNPFAI PLSAVVGIPL YIRAEAVIPL ASVLMTKGMG LGALMALIIG SAGASLTEVI
LLKSMFRIPM IVAFLTVILG MAILMGYLTQ MLF
|
|---|
| |