| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3769 |
|---|
| Symbol | |
|---|
| ID | 6147163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3832532 |
|---|
| End bp | 3833890 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641618595 |
|---|
| Product | PEP-dependent sugar transporting PTS family, IIC component |
|---|
| Protein accession | YP_001745735 |
|---|
| Protein GI | 170682820 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
|---|
| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA TCGCGCATAC CCTCTATAAT ATTGTGCAAT ATATATTGGG ATTTGGCCCC
ACGGTAATGT TGCCGTTGGT GTTATTTATT CTTGCTCTCT GTTTTAAAGT AAAACCCGCT
AAAGCCTTAC GCTCGTCATT AACGGTCGGC ATTGGTTTTG TCGGTATTTA TGCCATTTTC
GATATTCTTA CCAGCAATGT CGGGCCAGCG GCCCAGGCGA TGGTTGAACG CACCGGAATT
AATTTACCGG TGGTGGATTT AGGCTGGCCG CCGCTTTCTG CCATTACCTG GGGGTCGCCA
ATTGCCCCGT TTGTTATTCC CCTGACCATT CTGATTAATG TCGCAATGCT GGCGTTGAAT
AAAACCCGCA CCGTTGATGT AGATATGTGG AACTACTGGC ATTTTGCCCT TGCCGGTACG
CTGGTTTATT ACAGCACCGG CAGCCTGTTC TTTGGTTTGC TGGCGGCCGC GATTGCCGCA
GTGGTGGTGC TAAAACTCGC CGACTGGTCT GCGCCACTGG TACAAAAATA CTTTGGCCTG
GAAGGGATCT CATTGCCGAC GCTCTCTTCG GTGGTGTTCT TCCCGGTCGG TCTGCTGGTC
GACAAAATCA TCGACCATAT CCCTGGCCTC AATCGTATTC ATATCGACCC GGAAACCGTA
CAGAAAAAGT TTGGCATCTT CGGCGAACCG ATGATGGTTG GCACTATTCT GGGCATTCTG
CTCGGCGTAA TTGCCGGATA CGATTTCAAA AAAGTCTTGC TGCTTGGCAT CAGCATTGGC
GGTGTGATGT TCATCCTGCC ACGCATGGTA CGCATCCTGA TGGAAGGTTT ATTACCGCTG
TCTGAAGCCA TTAAAAAGTA TCTCAATGCC AAATACCCTG ACCGTGACGA TCTCTATATC
GGCCTGGATA TCGCCGTTGC CGTAGGTAAC CCGGCGATTA TCTCCACCGC CCTGCTGCTG
ACGCCAATCT CGGTCTTTAT CGCGTTTGTC CTCCCAGGTA ATGAAGTCCT GCCGCTTGGT
GACCTTGCCA ACCTGGCGGT AATGGCGTCG ATGATTGCTT TAGCCAGCCG TGGCAATATT
TTCCGCACCG TTCTGGCGGC GATCCCGGTG ATTATTGCCG ACCTGTGGAT TGCCACTAAA
ATCGCGCCGT TTATTACCGG AATGGCGAAA GACGTTAACT TCAAATTTGC CGAAGGCTCC
AGCGGCCAGG TTTCCAGTTT CCTTGATGGC GGTAACCCGT TCCGCTTCTG GCTGCTGGAA
ATCTTCAACG GCAATCTCAT CGCCATTGGT CTGGTGCCGG TTATCGCCCT GGTACTGTAT
GGCATTTTCC GAATGACGCG GAGCACGGTT TATGCCTGA
|
|---|
| Protein sequence | MNDIAHTLYN IVQYILGFGP TVMLPLVLFI LALCFKVKPA KALRSSLTVG IGFVGIYAIF
DILTSNVGPA AQAMVERTGI NLPVVDLGWP PLSAITWGSP IAPFVIPLTI LINVAMLALN
KTRTVDVDMW NYWHFALAGT LVYYSTGSLF FGLLAAAIAA VVVLKLADWS APLVQKYFGL
EGISLPTLSS VVFFPVGLLV DKIIDHIPGL NRIHIDPETV QKKFGIFGEP MMVGTILGIL
LGVIAGYDFK KVLLLGISIG GVMFILPRMV RILMEGLLPL SEAIKKYLNA KYPDRDDLYI
GLDIAVAVGN PAIISTALLL TPISVFIAFV LPGNEVLPLG DLANLAVMAS MIALASRGNI
FRTVLAAIPV IIADLWIATK IAPFITGMAK DVNFKFAEGS SGQVSSFLDG GNPFRFWLLE
IFNGNLIAIG LVPVIALVLY GIFRMTRSTV YA
|
|---|
| |