Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3706 |
Symbol | glpD |
ID | 6143533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3769545 |
End bp | 3771050 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641618533 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_001745673 |
Protein GI | 170682330 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.166207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA AAGATCTGAT TGTGATAGGT GGCGGCATCA ATGGTGCTGG TATCGCGGCA GACGCCGCTG GACGCGGTTT ATCCGTGCTG ATGCTGGAGG CGCAGGATCT CGCTTGCGCG ACCTCTTCCG CCAGTTCAAA ACTCATTCAC GGTGGCCTGC GCTACCTTGA GCACTATGAA TTCCGCCTGG TCAGCGAGGC GCTGGCTGAA CGTGAAGTGT TGCTGAAAAT GGCTCCGCAT ATCGCCTTCC CGATGCGTTT TCGCCTGCCA CATCGTCCGC ATCTGCGCCC GGCGTGGATG ATTCGCATTG GTCTGTTTAT GTACGATCAT CTGGGTAAAC GCACCAGCCT GCCGGGATCA ACCGGTTTGC GTTTTGGCGC AAACTCAGTG TTAAAACCGG AAATTAAGCG CGGATTCGAA TATTCTGACT GTTGGGTAGA CGACGCCCGT CTGGTACTCG CCAACGCCCA GATGGTGGTA CGTAAAGGCG GTGAAGTGCT TACTCGTACT CGTGCCACTT CTGCTCGCCG CGAAAACGGC CTGTGGATTG TGGAAGCAGA AGATATCGAT ACCGGCAAAA AATACACCTG GCAGGCGCGC GGCCTGGTGA ACGCCACCGG CCCGTGGGTG AAACAATTTT TCGACGACGG GATGCATCTG CCTTCACCTT ATGGCATTCG CCTGATCAAA GGCAGCCATA TTGTGGTGCC ACGCGTGCAT ACCCAGAAGC AAGCCTACAT TCTGCAAAAC GAAGATAAAC GTATTGTGTT CGTGATCCCG TGGATGGACG AGTTTTCCAT CATCGGCACC ACCGATGTGG AATACAAAGG TGATCCGAAA GCCGTGAAGA TTGAAGAGAG TGAAATCAAT TACCTGCTGA AAGTGTATAA CACGCACTTT AAAAAGCAGC TAAGCCGTGA CGATATCGTC TGGACTTACT CCGGCGTGCG TCCGCTGTGT GATGATGAGT CCGACTCGCC GCAGGCAATT ACCCGTGATT ACACCCTTGA TATCCATGAC GAAAACGGCA AAGCACCGCT GCTGTCGGTA TTCGGCGGTA AGCTGACCAC CTACCGCAAA CTGGCGGAAC ATGCGCTGGA AAAACTAACG CCGTATTATC AGGGTATTGG CCCGGCGTGG ACGAAAGAGA GCGTGCTGCC GGGTGGTGCC ATTGAAGGCG ATCGCGACGA TTATGCCGCT CGCCTGCGCC GCCGTTACCC GTTCCTGACT GAATCGCTGG CACGTCACTA CGCGCGCACT TACGGCAGCA ACAGCGAACT GCTGCTCGGC AATGCGGGGG CGATAAGCGA CCTCGGGGAG GATTTCGGTC ATGAGTTCTA CGAAGCGGAA CTGAAATACC TGGTGGATCA CGAATGGGTC CGTCGCGCCG ACGATGCCCT GTGGCGTCGC ACAAAACAAG GCATGTGGCT AAATGCGGAT CAACAATCTC GTGTGAGTCA GTGGCTGGTG GAGTATACGC AGCAGAAGTT GTCGCTGGCG TCGTAA
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Protein sequence | METKDLIVIG GGINGAGIAA DAAGRGLSVL MLEAQDLACA TSSASSKLIH GGLRYLEHYE FRLVSEALAE REVLLKMAPH IAFPMRFRLP HRPHLRPAWM IRIGLFMYDH LGKRTSLPGS TGLRFGANSV LKPEIKRGFE YSDCWVDDAR LVLANAQMVV RKGGEVLTRT RATSARRENG LWIVEAEDID TGKKYTWQAR GLVNATGPWV KQFFDDGMHL PSPYGIRLIK GSHIVVPRVH TQKQAYILQN EDKRIVFVIP WMDEFSIIGT TDVEYKGDPK AVKIEESEIN YLLKVYNTHF KKQLSRDDIV WTYSGVRPLC DDESDSPQAI TRDYTLDIHD ENGKAPLLSV FGGKLTTYRK LAEHALEKLT PYYQGIGPAW TKESVLPGGA IEGDRDDYAA RLRRRYPFLT ESLARHYART YGSNSELLLG NAGAISDLGE DFGHEFYEAE LKYLVDHEWV RRADDALWRR TKQGMWLNAD QQSRVSQWLV EYTQQKLSLA S
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