| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3593 |
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| Symbol | rpsM |
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| ID | 6143979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3669350 |
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| End bp | 3669706 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618420 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001745560 |
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| Protein GI | 170683249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00190616 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0522368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCATAAGC ATGCCGTAAT CGCATTAACT
TCGATTTATG GCGTCGGCAA GACCCGTTCT AAAGCCATCC TGGCTGCAGC GGGTATCGCT
GAAGATGTTA AGATCAGTGA GCTGTCTGAA GGACAAATCG ACACGCTGCG TGACGAAGTT
GCCAAATTTG TCGTTGAAGG TGATCTGCGC CGTGAAATCA GCATGAGCAT CAAGCGCCTG
ATGGATCTTG GTTGCTATCG CGGTTTGCGT CATCGTCGTG GTCTCCCGGT TCGCGGTCAG
CGTACCAAGA CCAACGCACG TACCCGTAAG GGTCCGCGCA AACCGATCAA GAAATAA
|
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| Protein sequence | MARIAGINIP DHKHAVIALT SIYGVGKTRS KAILAAAGIA EDVKISELSE GQIDTLRDEV
AKFVVEGDLR REISMSIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK
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