Gene EcSMS35_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3559 
Symbol 
ID6146661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3640203 
End bp3640865 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID641618388 
ProductDNA-binding transcriptional regulator EnvR 
Protein accessionYP_001745535 
Protein GI170683693 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00735263 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA GAACCAAAGC CGAAGCTCTG AAGACCCGGC AAGAACTGAT TGAAACTGCC 
ATCGCCCAGT TTGCGCAACA TGGCGTAAGC AAGACGACGC TCAACGACAT TGCCGATGCC
GCTAACGTTA CGCGTGGCGC TATCTACTGG CACTTCGAGA ACAAGACCCA ACTGTTTAAT
GAGATGTGGT TGCAACAGCC TTCATTGCGG GAGTTAATCC AGGAACACTT GACGGCTGGG
TTAGAGCATG ACCCGTTTCA ACAATTGCGT GAAAAATTGA TTGTCGGCTT GCAATATATT
GCCAAAATTC CCCGCCAGCA GGCGTTGCTG AAAATCTTAT ATCACAAATG TGAATTTAAT
GATGAGATGC TGGCAGAGGG AGTGATACGC GATAAGATGG GCTTTAATCC GCAGACTCTC
CACGAAGTAT TGCAGGCATG TCAGCAACAA GGTTGTATAG CAAATAATCT CGATTTAGAT
GTTGTGATGA TTATTATTGA TGGTGCCTTC AGCGGAATTG TTCAAAACTG GTTAATGAAT
ATGGCGGGTT ATGATCTTTA TAAACAAGCA CCCGCACTGG TCGATAACGT ATTAAGAATG
TTCATGCCAG ATGAAAACAT AACGAAATTA ATTCATCAAA CGAATGAATT AAGTGTCATA
TAA
 
Protein sequence
MAKRTKAEAL KTRQELIETA IAQFAQHGVS KTTLNDIADA ANVTRGAIYW HFENKTQLFN 
EMWLQQPSLR ELIQEHLTAG LEHDPFQQLR EKLIVGLQYI AKIPRQQALL KILYHKCEFN
DEMLAEGVIR DKMGFNPQTL HEVLQACQQQ GCIANNLDLD VVMIIIDGAF SGIVQNWLMN
MAGYDLYKQA PALVDNVLRM FMPDENITKL IHQTNELSVI