| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3509 |
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| Symbol | gltD |
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| ID | 6146884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3585810 |
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| End bp | 3587228 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618338 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001745485 |
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| Protein GI | 170682339 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGA ATGTTTATCA ATTTATCGAC CTGCAGCGCG TTGATCCGCC AAAGAAACCG
CTGAAGATCC GCAAAATTGA GTTTGTTGAA ATTTACGAGC CGTTTTCCGA AGGCCAGGCC
AAAGCGCAGG CTGACCGCTG CCTGTCGTGC GGCAACCCAT ACTGCGAGTG GAAATGCCCG
GTACACAACT ACATCCCGAA CTGGCTGAAG CTCGCCAACG AGGGGCGTAT TTTTGAAGCG
GCGGAACTGT CGCATCAGAC CAATACCCTG CCGGAAGTGT GCGGACGTGT CTGCCCGCAA
GACCGTCTGT GCGAAGGTTC CTGCACCCTG AACGATGAGT TCGGCGCAGT GACCATCGGC
AACATTGAGC GCTATATCAA CGATAAAGCG TTCGAGATGG GCTGGCGTCC GGATATGTCC
GGCGTGAAAC AGACCGGTAA AAAAGTGGCG ATTATCGGCG CAGGCCCGGC GGGTCTGGCG
TGTGCAGATG TCCTGACGCG CAACGGCGTA AAAGCAGTCG TCTTCGACCG TCACCCGGAA
ATCGGCGGCT TGCTGACCTT CGGTATTCCG GCCTTCAAGC TGGAAAAAGA GGTAATGACG
CGCCGCCGTG AAATCTTCAC GGGCATGGGT ATTGAATTCA AACTCAATAC CGAAGTGGGC
CGCGACGTAC AGCTGGACGA TCTGCTGAGT GATTACGATG CCGTGTTCCT TGGCGTCGGG
ACTTATCAGT CAATGCGCGG CGGGCTGGAA AACGAAGACG CCGATGGCGT GTACGCAGCG
CTGCCGTTCC TTATCGCCAA CACCAAACAG TTAATGGGCT TTGGCGAAAC CAACGACGAA
CCGTTCGTCA GCATGGAAGG CAAACGCGTG GTGGTCCTTG GCGGTGGCGA CACTGCGATG
GACTGCGTGC GCACGTCTGT ACGCCAGGGG GCAAAGCACG TTACCTGTGC CTATCGTCGT
GATGAAGAGA ACATGCCGGG TTCCCGCCGC GAAGTGAAAA ACGCGCGGGA AGAAGGTGTT
GAGTTCAAAT TCAACGTCCA GCCGCTGGGT ATAGAAGTGA ACGGTAACGG CAAAGTCAGC
GGCGTAAAAA TGGTGCGCAC AGAAATGGGC GAACCGGATG CCAAAGGCCG TCGCCGCGCA
GAGATCGTGG CAGGGTCAGA ACATATCGTT CCGGCAGATG CGGTGATCAT GGCGTTTGGT
TTCCGTCCAC ACAGCATGGA ATGGCTGGCA AAACACAGCG TCGAGCTGGA TTCGCAGGGG
CGCATTATCG CCCCGGAAGG CAACGACAAC GCTTTCCAGA CCAGCAACCC GAAAATCTTT
GCTGGCGGCG ATATCGTCCG TGGTTCCGAT CTGGTCGTTA CCGCCATTGC CGAAGGTCGC
AAAGCGGCAG ACGGCATTAT GAACTGGCTG GAAGTTTAA
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| Protein sequence | MSQNVYQFID LQRVDPPKKP LKIRKIEFVE IYEPFSEGQA KAQADRCLSC GNPYCEWKCP
VHNYIPNWLK LANEGRIFEA AELSHQTNTL PEVCGRVCPQ DRLCEGSCTL NDEFGAVTIG
NIERYINDKA FEMGWRPDMS GVKQTGKKVA IIGAGPAGLA CADVLTRNGV KAVVFDRHPE
IGGLLTFGIP AFKLEKEVMT RRREIFTGMG IEFKLNTEVG RDVQLDDLLS DYDAVFLGVG
TYQSMRGGLE NEDADGVYAA LPFLIANTKQ LMGFGETNDE PFVSMEGKRV VVLGGGDTAM
DCVRTSVRQG AKHVTCAYRR DEENMPGSRR EVKNAREEGV EFKFNVQPLG IEVNGNGKVS
GVKMVRTEMG EPDAKGRRRA EIVAGSEHIV PADAVIMAFG FRPHSMEWLA KHSVELDSQG
RIIAPEGNDN AFQTSNPKIF AGGDIVRGSD LVVTAIAEGR KAADGIMNWL EV
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