Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3499 |
Symbol | yfiA |
ID | 6143330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3572786 |
End bp | 3573073 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641618328 |
Product | putative sigma(54) modulation protein |
Protein accession | YP_001745475 |
Protein GI | 170683293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCA ACATTACCGG AAATAACGTC GAGATCACCG AGGCACTGCG CGAATTTGTT ACAGCCAAAT TTGCCAAACT TGAGCAATAT TTTGACCGAA TCAACCAGGT CTATGTTGTT CTGAAAGTGG AGAAAGTCAC CCACACCTCA GATGCAACAC TGCATGTAAA CGGTGGTGAA ATTCATGCCA GCGCGGAAGG TCAGGACATG TACGCTGCCA TTGATGGCTT AATTGATAAG CTGGCACGCC AGTTGACCAA ACATAAAGAT AAACTGAAAC AACACTAA
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Protein sequence | MQLNITGNNV EITEALREFV TAKFAKLEQY FDRINQVYVV LKVEKVTHTS DATLHVNGGE IHASAEGQDM YAAIDGLIDK LARQLTKHKD KLKQH
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