Gene EcSMS35_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3476 
Symbol 
ID6145507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3554546 
End bp3554839 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content49% 
IMG OID641618305 
ProductRNA-binding protein YhbY 
Protein accessionYP_001745452 
Protein GI170681512 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000313113 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA GTACTAAACA AAAACAGCAC CTGAAAGGTC TGGCACATCC GCTCAAGCCA 
GTTGTTCTGC TTGGCAGTAA TGGTTTGACC GAAGGGGTGC TGGCCGAGAT TGAACAAGCG
TTAGAGCACC ATGAACTCAT CAAGGTGAAA ATCGCCACCG AAGATCGCGA AACTAAAACC
TTGATCGTGG AAGCTATCGT GCGCGAAACC GGCGCCTGTA ATGTACAGGT CATCGGTAAA
ACGCTGGTGC TTTATCGCCC AACTAAAGAA CGTAAAATCT CGCTGCCACG CTAA
 
Protein sequence
MNLSTKQKQH LKGLAHPLKP VVLLGSNGLT EGVLAEIEQA LEHHELIKVK IATEDRETKT 
LIVEAIVRET GACNVQVIGK TLVLYRPTKE RKISLPR