| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3430 |
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| Symbol | agaV |
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| ID | 6145021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3510053 |
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| End bp | 3510526 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641618259 |
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| Product | PTS system N-acetylgalactosamine-specific transporter subunit IIB |
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| Protein accession | YP_001745408 |
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| Protein GI | 170683585 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
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| TIGRFAM ID | [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAATA TTGTTTTAAG CCGGATTGAT GAGCGTTTGA TTCACGGTCA GGTCGGCGTT
CAGTGGGTCG GATTTGCGGG GGCAAATCTG GTGCTGGTAG CCAACGATGA GGTTGCCGAA
GATCCGGTAC AACAAAACCT GATGGAAATG GTACTGGCAG AAGGGATCGC CGTACGTTTC
TGGACGCTGC AAAAAGTCAT CGACAACATT CATCGCGCCG CCGATCGACA GAAAATCCTG
CTGGTTTGTA AAACACCTGC CGATTTCCTG ACGCTGGTGA AAGGTGGCGT TCCGGTGAAT
CGCATTAACG TTGGCAATAT GCACTACGCC AATGGCAAGC AACAAATCGC CAAAACGGTT
TCTGTGGATG CGGGTGATAT CGCAGCATTT AACGACCTGA AAGCCGCTGG GGTGGAATGC
TTCGTTCAGG GCGTCCCAAC AGAGCCTGCA GTGGACCTCT TTAAATTACT TTGA
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| Protein sequence | MPNIVLSRID ERLIHGQVGV QWVGFAGANL VLVANDEVAE DPVQQNLMEM VLAEGIAVRF
WTLQKVIDNI HRAADRQKIL LVCKTPADFL TLVKGGVPVN RINVGNMHYA NGKQQIAKTV
SVDAGDIAAF NDLKAAGVEC FVQGVPTEPA VDLFKLL
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