Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3419 |
Symbol | garK |
ID | 6143943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3500461 |
End bp | 3501606 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618248 |
Product | glycerate kinase I |
Protein accession | YP_001745397 |
Protein GI | 170683586 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1929] Glycerate kinase |
TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG TAATCGCCCC AGACTCTTAT AAAGAAAGTT TATCTGCCAG CGAGGTTGCG CAGGCGATAG AAAAAGGATT TCGGGAAATT TTTCCTGATG CACAGTACGT TTCTGTTCCT GTTGCCGATG GTGGCGAAGG AACGGTGGAA GCGATGATTG CAGCCACCCA GGGTTCCGAA CGTCACGCCT GGGTTACAGG GCCGCTGGGC GAGAAGGTGA ATGCCAGTTG GGGGATCTCC GGCGATGGCA AAACCGCGTT TATTGAAATG GCGGCGGCCA GTGGGCTGGA GCTGGTACCT GCGGAAAAAC GTGATCCACT CGTGACCACT TCACGCGGCA CAGGCGAGTT AATTCTGCAG GCGCTGGAGA GCGGCGCGAC AAACATTATT ATCGGCATTG GCGGTAGCGC TACAAATGAT GGCGGTGCAG GCATGGTACA GGCGCTGGGG GCGAAATTAT GCGACGCCAA CGGCAATGAA ATTGGTTTTG GCGGCGGTAG TCTTAATACT CTGAATGATA TTGATATTTC CGGCCTCGAT CCGCGCTTAA AAGATTGCGT CATTCGCGTC GCTTGTGATG TCACCAATCC GCTGGTGGGC GATAACGGCG CATCGCGCAT CTTTGGCCCA CAAAAGGGAG CCAGTGAAGC GATGATTGTT GAGCTGGACA ATAACCTTTC TCACTATGCC GATGTCATTA AAAAAGCGCT GCATGTTGAT GTGAAAGATG TCCCCGGCGC AGGAGCTGCG GGTGGTATGG GCGCGGCGCT AATGGCGTTT CTTGGTGCGG AACTGAAAAG CGGTATTGAA ATCGTCACGA CGGCGCTGAA TCTGGAGGAA CATATTCACG ATTGTACGCT GGTGATCACC GGTGAAGGGC GTATTGACAG CCAGAGTATA CACGGCAAGG TTCCGATTGG CGTCGCAAAC GTGGCGAAAA AGTACCATAA ACCGGTGATT GGCATTGCGG GTAGCCTGAC CAATGATGTT GGCGTTGTAC ATCAGCATGG CATTGATGCG GTCTTCAGCG TATTGACCAG TATTGGTACG TTGGACGAAG CATTCCGCGG GGCTTATGAC AATATTTACC GTGCTTCACG TAATATCGCC GCGACACTGG CGATTGGAAT GCGCAACGCG GGGTGA
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Protein sequence | MKIVIAPDSY KESLSASEVA QAIEKGFREI FPDAQYVSVP VADGGEGTVE AMIAATQGSE RHAWVTGPLG EKVNASWGIS GDGKTAFIEM AAASGLELVP AEKRDPLVTT SRGTGELILQ ALESGATNII IGIGGSATND GGAGMVQALG AKLCDANGNE IGFGGGSLNT LNDIDISGLD PRLKDCVIRV ACDVTNPLVG DNGASRIFGP QKGASEAMIV ELDNNLSHYA DVIKKALHVD VKDVPGAGAA GGMGAALMAF LGAELKSGIE IVTTALNLEE HIHDCTLVIT GEGRIDSQSI HGKVPIGVAN VAKKYHKPVI GIAGSLTNDV GVVHQHGIDA VFSVLTSIGT LDEAFRGAYD NIYRASRNIA ATLAIGMRNA G
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