Gene EcSMS35_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3391 
SymbolexuR 
ID6146241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3476714 
End bp3477490 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID641618220 
ProductDNA-binding transcriptional repressor ExuR 
Protein accessionYP_001745369 
Protein GI170680363 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CTGAACCACG CCGTTTGTAT CAACAACTTG CCGCTGATCT GAAAGAGCGC 
ATCGAACAGG GCGTCTATCT GGTAGGTGAT AAACTGCCTG CCGAACGCTT TATTGCCGAT
GAAAAAAACG TCAGCCGCAC CGTGGTTCGT GAAGCCATCA TCATGCTGGA AGTTGAAGGC
TATGTCGAAG TGCGTAAAGG TTCAGGTATT CATGTGGTTT CCAACCAGCC GCGCCATCAG
CAATCGGCTG ACAATAATAT GGAGTTTGCC AATTACGGTC CGTTTGAGCT ACTGCAAGCC
CGCCAGCTCA TCGAAAGTAA TATTGCCGAG TTCGCGGCAA CTCAGGTCAC AAAACAGGAC
ATCATGAAAT TGATGGCCAT CCAGGAGCAG GCGCGCGGCG AACAATGCTT CCGTGATTCC
GAGTGGGATT TGCAGTTCCA TATTCAGGTA GCCCTGGCGA CGCAGAACTC CGCCCTGGCG
GCTATCGTTG AAAAAATGTG GACCCAGCGT AGTCATAACC CGTACTGGAA AAAACTGCAC
GAACACATTG ATGCCCGTAC CGTCGATAAC TGGTGTGATG ACCACGATCA AATCCTCAAG
GCGCTGATTC GCAAAGATCC TCATGCTGCT AAGCTGGCAA TGTGGCAGCA CCTGGAAAAC
ACCAAGATCA TGTTATTTAA CGAAACCAGC GACGATTTCG AGTTCAATGC CGACCGCTAT
CTGTTCGCCG AAAACCCGGT GGTGCATCTC GATACAGCCA CCAGCGGCAG TAAATGA
 
Protein sequence
MEITEPRRLY QQLAADLKER IEQGVYLVGD KLPAERFIAD EKNVSRTVVR EAIIMLEVEG 
YVEVRKGSGI HVVSNQPRHQ QSADNNMEFA NYGPFELLQA RQLIESNIAE FAATQVTKQD
IMKLMAIQEQ ARGEQCFRDS EWDLQFHIQV ALATQNSALA AIVEKMWTQR SHNPYWKKLH
EHIDARTVDN WCDDHDQILK ALIRKDPHAA KLAMWQHLEN TKIMLFNETS DDFEFNADRY
LFAENPVVHL DTATSGSK