| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3358 |
|---|
| Symbol | rpsU |
|---|
| ID | 6146405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3436299 |
|---|
| End bp | 3436514 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641618187 |
|---|
| Product | 30S ribosomal protein S21 |
|---|
| Protein accession | YP_001745337 |
|---|
| Protein GI | 170680203 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0828] Ribosomal protein S21 |
|---|
| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000749532 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTAA TTAAAGTACG TGAAAACGAG CCGTTCGACG TAGCTCTGCG TCGCTTCAAG
CGTTCCTGCG AAAAAGCAGG TGTTCTGGCG GAAGTTCGTC GTCGTGAGTT CTATGAAAAA
CCGACTACCG AACGTAAGCG CGCTAAAGCT TCTGCAGTGA AACGTCACGC GAAGAAACTG
GCTCGCGAAA ACGCACGCCG CACTCGTCTG TACTAA
|
|---|
| Protein sequence | MPVIKVRENE PFDVALRRFK RSCEKAGVLA EVRRREFYEK PTTERKRAKA SAVKRHAKKL
ARENARRTRL Y
|
|---|
| |