| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3344 |
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| Symbol | hldE |
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| ID | 6145779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3420937 |
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| End bp | 3422370 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618173 |
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| Product | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase |
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| Protein accession | YP_001745323 |
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| Protein GI | 170683743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.078646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAA CGCTGCCAGA GTTTGAACGT GCAGGAGTGA TGGTGGTTGG TGATGTGATG
CTGGATCGTT ACTGGTACGG TCCCACCAGC CGTATCTCGC CGGAAGCGCC GGTGCCCGTG
GTTAAAGTGA ATACCATCGA AGAACGTCCG GGCGGCGCGG CTAACGTGGC GATGAATATC
GCTTCTCTCG GTGCTAATGC ACGCCTGGTC GGGTTGACGG GCATTGACGA TGCAGCGCGC
GCGCTGAGTA AATCTCTGGC CGACGTCAAC GTCAAATGCG ACTTCGTTTC TGTACCGACG
CATCCGACTA TCACCAAATT ACGGGTGCTT TCCCGCAACC AACAGCTGAT TCGTCTGGAT
TTTGAAGAAG GTTTCGAAGG TGTTGATCCG CAACCGCTGC ACGAACGGAT TAATCAGGCG
CTGAGTTCGA TTGGCGCGCT GGTGCTTTCT GACTACGCCA AAGGTGCGCT GGCAAGCGTA
CAGCAGATGA TCCAACTGGC GCGTAAAGCG GGTGTTCCGG TGCTGATTGA TCCAAAAGGT
ACCGATTTTG AGCGCTACCG CGGCGCTACG CTGTTAACGC CGAATCTCTC GGAATTTGAA
GCTGTTGTCG GTAAATGTAA GACCGAAGAA GAGATTGTTG AGCGCGGCAT GAAACTAATT
GCCGATTACG AACTCTCGGC TCTGTTAGTG ACCCGTTCCG AACAGGGTAT GTCGCTGCTG
CAACCGGGTA AAGCGCCGCT GCATATGCCA ACCCAGGCGC AGGAAGTGTA TGACGTTACC
GGTGCGGGCG ACACGGTGAT TGGCGTCCTG GCGGCAACGC TGGCAGCGGG TAATTCGCTG
GAAGAAGCCT GCTTCTTTGC CAATGCGGCG GCTGGTGTGG TGGTCGGCAA ACTGGGGACA
TCCACGGTTT CGCCGATCGA GCTGGAAAAC GCAGTACGTG GACGTGCAGA TACCGGCTTT
GGCGTGATGA CCGAAGAGGA ACTGAAGCTT GCTGTAGCGG CAGCGCGTAA ACGCGGTGAA
AAAGTGGTGA TGACCAATGG CGTCTTTGAC ATCCTGCACG CCGGACACGT CTCTTATCTG
GCAAATGCCC GCAAACTGGG TGACCGTTTG ATTGTCGCCG TCAACAGCGA TGCCTCCACC
AAACGGCTGA AAGGGGATTC CCGCCCCGTT AACCCGCTTG AACAGCGTAT GATTGTGCTG
GGCGCACTGG AAGCGGTCGA CTGGGTGGTG TCGTTTGAAG AAGACACGCC GCAGCGCTTG
ATCGCCGGGA TCCTGCCAGA CCTGCTGGTG AAAGGCGGCG ATTATAAACC AGAAGAGATT
GCCGGGAGTA AAGAAGTCTG GGCCAATGGT GGCGAAGTGC TGGTGCTCAA CTTTGAAGAC
GGTTGCTCGA CCACTAACAT TATCAAGAAG ATCCAACAGG ATAAAAAAGG CTAA
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| Protein sequence | MKVTLPEFER AGVMVVGDVM LDRYWYGPTS RISPEAPVPV VKVNTIEERP GGAANVAMNI
ASLGANARLV GLTGIDDAAR ALSKSLADVN VKCDFVSVPT HPTITKLRVL SRNQQLIRLD
FEEGFEGVDP QPLHERINQA LSSIGALVLS DYAKGALASV QQMIQLARKA GVPVLIDPKG
TDFERYRGAT LLTPNLSEFE AVVGKCKTEE EIVERGMKLI ADYELSALLV TRSEQGMSLL
QPGKAPLHMP TQAQEVYDVT GAGDTVIGVL AATLAAGNSL EEACFFANAA AGVVVGKLGT
STVSPIELEN AVRGRADTGF GVMTEEELKL AVAAARKRGE KVVMTNGVFD ILHAGHVSYL
ANARKLGDRL IVAVNSDAST KRLKGDSRPV NPLEQRMIVL GALEAVDWVV SFEEDTPQRL
IAGILPDLLV KGGDYKPEEI AGSKEVWANG GEVLVLNFED GCSTTNIIKK IQQDKKG
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