| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3311 |
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| Symbol | |
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| ID | 6145653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3388889 |
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| End bp | 3390496 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618140 |
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| Product | putative binding protein |
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| Protein accession | YP_001745290 |
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| Protein GI | 170680624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.43332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.120975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACGC GAAATTTATT ATGGCTGGTC AGCCTGGTAA GTGCGGCTCC TCTCTACGCT
GCTGACGTTC CCGCCAACAC ACCGCTCGCC CCGCAACAAG TCTTTCGTTA CAACAATCAT
AGCGACCCAG GCACGCTCGA CCCGCAAAAG GTGGAGGAGA ATACTGCCGC GCAGATTGTG
CTGGATCTGT TTGAAGGTCT GGTATGGATG GACGGTGAAG GCCAGGTGCA GCCCGCTCAG
GCTGAACGCT GGGAGATACT GGACGGCGGC AAGCGCTATA TTTTCCATCT GCGTAGCGGT
TTGCAGTGGT CAGACGGTCA GCCTCTGACG GCAGAGGATT TTGTCCTCGG CTGGCAGCGC
GCGGTTGACC CGAAAACGGC AAGCCCTTTT GCTGGCTATC TGGCACAGGC GCACATTAAC
AATGCCGCGG CTATTGTTGC GGGTAAAGCA GATGTTACAT CGCTGGGTGT CAAAGCGACG
GATGATCGTA CTCTTGAAGT TACGCTTGAG CAGCCAGTTC CTTGGTTCAC GACGATGCTC
GCCTGGCCGA CGCTGTTCCC GGTTCCTCAT CATGTCATCG CTAAACATGG CGATAGCTGG
AGTAAGCCAG AGAACATGGT TTACAACGGT GCCTTTGTGC TTGATCAGTG GGTAGTTAAC
GAAAAGATTA CTGCACGCAA AAATCCAAAG TACCGCGATG CGCAACATAC AGTATTGCAA
CAGGTTGAGT ATCTGGCGCT GGATAATTCG GTCACCGGCT ATAACCGCTA TCGCGCGGGA
GAGGTCGATC TCACCTGGGT TCCGGCGCAG CAAATTCCCG CCATTGAAAA ATCACTGCCT
GGCGAGCTAC GAATTATTCC GCGTCTGAAC AGCGAATATT ACAACTTCAA CCTTGAGAAA
CCGCCATTTA ACGATGTGCG GGTGCGTCGG GCGCTATATC TTACGGTTGA TCGACAGCTT
ATTGCGCAAA AGGTACTGGG GTTGAGAACG CCCGCAACTA CGCTGACGCC GCCAGAGGTA
AAAGGCTTTA GCGCGACGAC GTTCGATGAA CTGCAAAAGC CGCTGAGTGA GCGCGTCGCG
ATGGCAAAAG CCTTGTTGAA ACAGGCGGGA TACGACGCCT CTCATCCGCT TCGCTTTGAG
CTGTTCTACA ACAAGTACGA TCTGCATGAA AAGACCGCGA TAGCGTTGTC TTCCGAATGG
AAAAAATGGC TGGGTGCACA GGTGACGCTG CGCACAATGG AGTGGAAAAC TTATCTTGAT
GCCCGACGAG CCGGTGATTT CATGTTGTCT CGGCAGTCGT GGGATGCGAC GTACAATGAT
GCCTCCACCT TTCTGAACAC GCTTAAGAGC GATAGCGAGG AAAATGTCGG CCACTGGAAA
AACGCGCAGT ATGACGCCTT ACTAAACCAG GCGGCACAAA CGGCTGATGC AACAAAGCGT
AATGCGTTGT ATCAGCAGGC AGAAGTGATC ATCAACCAGC AGGCACCGCT CATTCCTGTC
TATTATCAGC CGTTAATCAA ACTGCTTAAA CCCTACGTTG GCGGTTTTCC GCTGCATAAT
CCCCAGGATT ATGTCTACAG CAAAGAGTTG TATATCAAGG CACATTGA
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| Protein sequence | MYTRNLLWLV SLVSAAPLYA ADVPANTPLA PQQVFRYNNH SDPGTLDPQK VEENTAAQIV
LDLFEGLVWM DGEGQVQPAQ AERWEILDGG KRYIFHLRSG LQWSDGQPLT AEDFVLGWQR
AVDPKTASPF AGYLAQAHIN NAAAIVAGKA DVTSLGVKAT DDRTLEVTLE QPVPWFTTML
AWPTLFPVPH HVIAKHGDSW SKPENMVYNG AFVLDQWVVN EKITARKNPK YRDAQHTVLQ
QVEYLALDNS VTGYNRYRAG EVDLTWVPAQ QIPAIEKSLP GELRIIPRLN SEYYNFNLEK
PPFNDVRVRR ALYLTVDRQL IAQKVLGLRT PATTLTPPEV KGFSATTFDE LQKPLSERVA
MAKALLKQAG YDASHPLRFE LFYNKYDLHE KTAIALSSEW KKWLGAQVTL RTMEWKTYLD
ARRAGDFMLS RQSWDATYND ASTFLNTLKS DSEENVGHWK NAQYDALLNQ AAQTADATKR
NALYQQAEVI INQQAPLIPV YYQPLIKLLK PYVGGFPLHN PQDYVYSKEL YIKAH
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