Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3297 |
Symbol | dkgA |
ID | 6146276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3371717 |
End bp | 3372544 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641618127 |
Product | 2,5-diketo-D-gluconate reductase A |
Protein accession | YP_001745277 |
Protein GI | 170682599 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.292953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATC CAACCGTTAT TAAGCTACAG GATGGCAATG TCATGCCCCA GTTGGGACTG GGCGTCTGGC AAGCAAGTAA TGAGGAAGTA ATCACCGCCA TTCAAAAAGC GTTAGACGTG GGTTATCGCT CGATTGATAC CGCCGCGGCC TACAAGAACG AAGAAGGTGT CGGCAAAGCC CTGAAAAATG CCTCAGTCAA CAGAGAAGAA CTGTTCATCA CCACTAAGCT GTGGAACGAC GACCACAAGC GCCCCCGCGA AGCCCTGCTC GACAGCCTGA AAAAACTCCA GCTTGATTAT ATCGACCTCT ATTTAATGCA CTGGCCCGTT CCCGCTATCG ACCATTATGT CGAAGCATGG AAGGGCATGA TCGAATTGCA AAAAGAGGGA TTAATCAAAA GCATTGGCGT GTGCAACTTC CAGATCCATC ACCTGCAACG CCTGATTGAT GAAACTGGCG TGACGCCTGT TATTAATCAG ATCGAACTTC ACCCGCTGAT GCAACAACGC CAGCTACATG CCTGGAACGC GACACACAAA ATCCAGACCG AATCCTGGAG CCCATTAGCG CAAGGAGGGA AAGGCGTTTT CGATCAGAAA GTCATTCGCG ATCTGGCAGA TAAATACGGC AAAACCCCGG CGCAGATTGT TATCCGCTGG CATCTGGATA GCGGCCTGGT GGTGATCCCG AAATCGGTCA CACCTTCACG TATTGCCGAA AACTTTGATG TCTGGGATTT CCGTCTCGAC AAAGACGAAC TCGGCGAAAT TGCAAAACTC GATCAGGGCA AGCGTCTCGG TCCCGATCCT GACCAGTTTG GCGGCTAA
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Protein sequence | MANPTVIKLQ DGNVMPQLGL GVWQASNEEV ITAIQKALDV GYRSIDTAAA YKNEEGVGKA LKNASVNREE LFITTKLWND DHKRPREALL DSLKKLQLDY IDLYLMHWPV PAIDHYVEAW KGMIELQKEG LIKSIGVCNF QIHHLQRLID ETGVTPVINQ IELHPLMQQR QLHAWNATHK IQTESWSPLA QGGKGVFDQK VIRDLADKYG KTPAQIVIRW HLDSGLVVIP KSVTPSRIAE NFDVWDFRLD KDELGEIAKL DQGKRLGPDP DQFGG
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