Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3293 |
Symbol | |
ID | 6144865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3368657 |
End bp | 3369316 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641618123 |
Product | hypothetical protein |
Protein accession | YP_001745273 |
Protein GI | 170683149 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.787334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTA TTCAAGATAT CATCGCTGCG CTCTGGCAAC ACGACTTTGC CGCGCTGGCG GATCCTCATA TTGTTAGCGT TGTTTACTTT GTCATGTTTG CCACGCTGTT TTTAGAAAAC GGCCTGCTGC CCGCCTCATT TTTGCCAGGC GACAGCTTGT TGATATTGGC TGGCGCATTG ATTGCCCAGG GGGTTATGGA TTTTCTGCCT ACGATTGCGA TTCTGACCGC CGCAGCAAGT CTGGGCTGCT GGCTAAGTTA TATTCAGGGG CGCTGGTTAG GAAATACCAA AACGGTGAAA GGCTGGCTGG CACAGCTTCC TGCTAAATAT CACCAGCGCG CCACCTGCAT GTTTGACCGC CACGGTCTGC TGGCGCTGCT GGCTGGACGT TTTCTTGCAT TTGTCCGTAC GCTGCTGCCA ACCATGGCAG GTATTTCCGG TTTGCCAAAC CGCCGTTTCC AGTTTTTCAA CTGGTTAAGC GGATTGCTGT GGGTCAGCGT GGTAACCAGT TTCGGCTATG CATTAAGTAT GATTCCGTTT GTTAAACGCC ATGAAGATCA GGTAATGACG TTCCTGATGA TCCTGCCAAT TGCCTTGTTA ACCGCTGGCT TGTTGGGCAC GCTGTTTGTG GTGATTAAAA AAAAATACTG TAACGCCTGA
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Protein sequence | MAVIQDIIAA LWQHDFAALA DPHIVSVVYF VMFATLFLEN GLLPASFLPG DSLLILAGAL IAQGVMDFLP TIAILTAAAS LGCWLSYIQG RWLGNTKTVK GWLAQLPAKY HQRATCMFDR HGLLALLAGR FLAFVRTLLP TMAGISGLPN RRFQFFNWLS GLLWVSVVTS FGYALSMIPF VKRHEDQVMT FLMILPIALL TAGLLGTLFV VIKKKYCNA
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