Gene EcSMS35_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3286 
Symbol 
ID6142969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3362181 
End bp3363068 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID641618116 
Productdienelactone hydrolase family protein 
Protein accessionYP_001745266 
Protein GI170684271 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTT TAACCGCCAA AGATTTCCCA CAAGAGTTGT TGGATTACTA CGACTATTAC 
GCTCACGGGA AAATCTCGAA ACGTGAGTTC CTCAACCTTG CGGCGAAGTA TGCGGTAGGC
GGGATGACGG CATTAGCGTT GTTTGATTTG CTCAAGCCAA ATTATGCGCT GGCGACTCAG
GTAGAGTTTA CCGACCCGGA GATTGTTGCT GAGTACATCA CGTATCCTTC GCCAAATGGT
CACGGCGAGG TACGGGGTTA TCTGGTGAAA CCCGCAAAAA TGAGCGGCAA AACGCCAGCC
GTGGTGGTGG TGCATGAGAA TCGTGGACTG AATCCGTATA TCGAAGATGT GGCACGGCGA
GTGGCGAAGG CGGGGTATAT CGCCCTGGCA CCTGACGGCT TAAGTTCCGT TGGAGGTTAT
CCGGGAAATG ATGATAAAGG TCGTGAGCTG CAACAGCAGG TTGATCCAAC CAAACTGATG
AATGATTTCT TTGCCGCAAT TGAGTTTATG CAACGCTATC CGCAAGCGAC AGGCAAAGTG
GGTATTACCG GATTTTGCTA TGGCGGTGGC GTATCGAACG CGGCGGCTGT CGCGTATCCG
GAACTGGCCT GCGCGGTGCC GTTTTATGGT CGCCAGGCAC CCACTGCCGA TGTGGCGAAG
ATTGAAGCGC CTTTACTACT CCACTTCGCG GAACTGGACA CCCGAATCAA CGAGGGCTGG
CCTGCTTACG AGGCGGCGTT GAAAGCCAAT AATAAGGTTT ATGAGGCGTA TATCTATCCG
GGGGTTAATC ACGGATTCCA TAATGATTCC ACGCCCCGTT ATGACAAATC TGCCGCCGAT
CTTGCCTGGC AAAGGACACT GAAATGGTTC GATAAATATC TCTCCTGA
 
Protein sequence
MPRLTAKDFP QELLDYYDYY AHGKISKREF LNLAAKYAVG GMTALALFDL LKPNYALATQ 
VEFTDPEIVA EYITYPSPNG HGEVRGYLVK PAKMSGKTPA VVVVHENRGL NPYIEDVARR
VAKAGYIALA PDGLSSVGGY PGNDDKGREL QQQVDPTKLM NDFFAAIEFM QRYPQATGKV
GITGFCYGGG VSNAAAVAYP ELACAVPFYG RQAPTADVAK IEAPLLLHFA ELDTRINEGW
PAYEAALKAN NKVYEAYIYP GVNHGFHNDS TPRYDKSAAD LAWQRTLKWF DKYLS