| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3233 |
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| Symbol | neuD |
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| ID | 6143421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3305661 |
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| End bp | 3306284 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641618063 |
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| Product | polysialic acid capsule biosynthesis protein NeuD |
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| Protein accession | YP_001745213 |
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| Protein GI | 170679748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.728164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA AATTAATAAT ATTTGGTGCG GGTGGTTTTT CAAAATCTAT AATTGACAGC
TTAAATCATA AACATTACGA GTTAATAGGA TTTATCGATA AATATAAAAG TGGTTATCAT
CAATCATATC CAATATTAGG TAATGATATT GCAGACATCG AGAATAAGGA TAATTATTAT
TATTTTATTG GGATAGGCAA ACCATCAACT AGGAAGCACT ATTTAAACAT CATAAGAAAA
CATAATCTAC GCTTAATTAA CATTATAGAT AAAACTGCTA TTCTATCACC AAATATTATA
CTGGGTGATG GAATTTTTAT TGGTAAAATG TGTATACTTA ACCGTGATAC TAGAATACAT
GATGCCGTTG TAATAAATAC TAGGAGTTTA ATTGAACATG GTAATGAAAT AGGCTGCTGT
AGCAATATCT CTACTAATGT TGTACTTAAT GGTGATGTTT CTGTTGGAGA AGAAACTTTT
GTTGGTAGCT GTACTGTTGT AAATGGCCAG TTGAAGCTAG GCTCAAAGAG TATTATTGGT
TCTGGGTCGG TTGTAATTAG AAATATACCA AGTAATGTTG TAGTTGCTGG GACTCCAACA
AGATTAATTA GGGGGAATGA ATGA
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| Protein sequence | MSKKLIIFGA GGFSKSIIDS LNHKHYELIG FIDKYKSGYH QSYPILGNDI ADIENKDNYY
YFIGIGKPST RKHYLNIIRK HNLRLINIID KTAILSPNII LGDGIFIGKM CILNRDTRIH
DAVVINTRSL IEHGNEIGCC SNISTNVVLN GDVSVGEETF VGSCTVVNGQ LKLGSKSIIG
SGSVVIRNIP SNVVVAGTPT RLIRGNE
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