| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3222 |
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| Symbol | kpsU |
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| ID | 6145744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3294202 |
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| End bp | 3294942 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618055 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001745205 |
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| Protein GI | 170680703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAG CAGTTATTGT CATTCCGGCT CGCTATGGCT CCTCGCGCCT GCCGGGTAAG
CCACTGCTCG ATATTGTTGG TAAACCGATG ATCCAGCATG TTTACGAGCG TGCGTTACAG
GTGGCGGGCG TTGCGGAAGT TTGGGTGGCA ACAGACGACC CGCGTGTTGA AAAGGCCGTG
CAGGCATTTG GCGGGAAAGC CATCATGACG CGCAACGATC ATGAATCCGG CACCGATCGG
CTGGTCGAGG TGATGCATAA AGTCGAGGCA GATATCTACA TTAACCTGCA GGGCGACGAA
CCAATGATTC GCCCGCGGGA TGTAGAAACG CTGTTACAAG GAATGCGTGA TGACACCGCG
TTGCCAGTGG CAACGCTATG CCACGCGATT TCTGCCGAAG AAGCGACCGA GCCAAGCACG
GTAAAAGTGG TTGTGAATAC CCGCCAGGAT GCGCTTTATT TCAGCCGTTC GCCGATTCCG
TATCCGCGTA ATGCTGAAAA AGCGCGCTAC CTGAAACACG TTGGTATTTA CGCTTATCGT
CGCGATGTGC TGCAAAACTA CAGTCAGTTA CCAAGGACGG CATTAAGTCA AATCGAGGAA
CTGGAGCAGC TACGGTTAAT GAACGCGGGG ATCAACATTC GCACATTTGA GGTTACCGCA
ACCGGTCCGG GCGTCGACAC CCCGGCATGC CTGGAAAAGG TGCGCGCTCT GATGGCGCAA
GAACTGGCCG AAAACGCATG A
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| Protein sequence | MSKAVIVIPA RYGSSRLPGK PLLDIVGKPM IQHVYERALQ VAGVAEVWVA TDDPRVEKAV
QAFGGKAIMT RNDHESGTDR LVEVMHKVEA DIYINLQGDE PMIRPRDVET LLQGMRDDTA
LPVATLCHAI SAEEATEPST VKVVVNTRQD ALYFSRSPIP YPRNAEKARY LKHVGIYAYR
RDVLQNYSQL PRTALSQIEE LEQLRLMNAG INIRTFEVTA TGPGVDTPAC LEKVRALMAQ
ELAENA
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