| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3137 |
|---|
| Symbol | |
|---|
| ID | 6144452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3223526 |
|---|
| End bp | 3223951 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641617998 |
|---|
| Product | IS66 family transposase orfA |
|---|
| Protein accession | YP_001745148 |
|---|
| Protein GI | 170681295 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAC AGGACTGGCG AAAAGAACCT CGTAAAAACT ATTCGAATGA ATTCAAACTT
CGTATGGTGG AACTGGCATC ACAACCTGGA GCTTGTGTTG CACAGATTGC ACGTGAAAAT
GGCGTCAATG ATAATGTTAT TTTCAAATGG CTCAGGCTCT GGCAGAACGA AGGGCGTGTT
TCGCGGCGTC TTCCGGTAAC GACCTCTTCT GACACTGGCG TTGAATTATT ACCTGTAGAA
ATAACGCCGG ATGAGCAGAA AGAACCTGTG GCGGCCATTG CGCCGTCTTT ATCCACTTCC
ACTCAGACCA GAGTCAGTGC CAGTTCCTGC AAGGTGGAAT TCCGTCACGG TAACATGACG
CTGGAAAATC CATCGCCAGA GCTGCTCACA GTGTTGATCC GTGAACTGAC CGGGAGGGGA
AGATGA
|
|---|
| Protein sequence | MELQDWRKEP RKNYSNEFKL RMVELASQPG ACVAQIAREN GVNDNVIFKW LRLWQNEGRV
SRRLPVTTSS DTGVELLPVE ITPDEQKEPV AAIAPSLSTS TQTRVSASSC KVEFRHGNMT
LENPSPELLT VLIRELTGRG R
|
|---|
| |