| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3023 |
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| Symbol | lysS |
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| ID | 6143305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3112457 |
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| End bp | 3113974 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617892 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001745043 |
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| Protein GI | 170682698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC AACACGCACA GGGCGCTGAC GCGGTAGTCG ATCTTAACAA TGAACTGAAA
ACGCGTCGTG AGAAGCTGGC GAACCTGCGC GAGCAGGGGA TTGCCTTCCC GAACGATTTC
CGTCGCGATC ATACCTCTGA CCAATTGCAC GCAGAATTCG ACGGTAAAGA GAACGAAGAA
CTGGAAGCGC TGAACATCGA AGTTGCCGTT GCTGGCCGCA TGATGACCCG TCGTATTATG
GGTAAAGCGT CTTTCGTTAC CCTGCAGGAC GTGGGGGGCC GCATTCAGCT GTACGTTGCC
CGTGACGATC TGCCGGAAGG CATTTACAAC GAGCAGTTCA AAAAATGGGA CCTCGGCGAC
ATCCTCGGCG CGAAAGGTAA ACTGTTCAAA ACCAAAACTG GCGAACTGTC TATCCACTGC
ACCGAGCTGC GTCTGCTGAC CAAAGCACTG CGTCCGCTGC CGGACAAATT CCACGGCTTG
CAGGATCAGG AAGCGCGCTA TCGTCAGCGT TATTTGGATC TCATCTCTAA CGATGAATCC
CGCAACACTT TTAAAGTGCG CTCGCAGATC CTCTCTGGTA TTCGCCAGTT CATGGTGAAC
CGCGGCTTTA TGGAAGTTGA AACGCCGATG ATGCAGGTGA TCCCAGGCGG TGCCGCTGCG
CGTCCGTTTA TCACCCACCA TAATGCGCTG GATCTCGACA TGTACCTGCG TATCGCGCCG
GAACTGTACC TCAAGCGTCT GGTGGTCGGT GGCTTCGAGC GTGTATTCGA AATCAACCGT
AACTTCCGTA ACGAAGGTAT CTCCGTACGT CATAACCCAG AGTTCACCAT GATGGAACTC
TATATGGCTT ACGCGGATTA CAAAGATCTG ATCGAGCTGA CCGAATCGCT GTTCCGTACT
CTGGCACAGG ATATTCTCGG TAAGACGGAA GTGACCTACG GCGACGTGAC GCTGGACTTC
GGTAAACCGT TCGAAAAACT GACCATGCGT GAAGCGATCA AGAAATATCG CCCGGAAACC
GACATGGCAG ATCTGGACAA CTTCGACTCT GCGAAAGCGA TTGCTGAATC TATCGGTATC
CACGTTGAGA AGAGCTGGGG TCTGGGCCGT ATCGTTACCG AGATCTTCGA AGAAGTGGCA
GAAGCACATC TGATTCAGCC GACCTTCATT ACTGAATATC CGGCAGAAGT TTCTCCGCTG
GCGCGTCGTA ACGACGTTAA CCCGGAAATC ACAGACCGCT TTGAGTTCTT CATTGGTGGT
CGTGAAATCG GTAACGGCTT TAGCGAGCTG AATGACGCGG AAGATCAGGC GCAGCGCTTC
CTGGATCAGG TTGCCGCGAA AGACGCAGGC GACGACGAAG CGATGTTCTA CGACGAAGAT
TATGTCACCG CACTGGAACA TGGCTTACCG CCGACAGCAG GTCTGGGAAT TGGTATCGAC
CGTATGGTAA TGCTGTTCAC CAACAGCCAT ACCATCCGCG ACGTTATTCT GTTCCCGGCG
ATGCGTCCGG TGAAATAA
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| Protein sequence | MSEQHAQGAD AVVDLNNELK TRREKLANLR EQGIAFPNDF RRDHTSDQLH AEFDGKENEE
LEALNIEVAV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDDLPEGIYN EQFKKWDLGD
ILGAKGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEARYRQR YLDLISNDES
RNTFKVRSQI LSGIRQFMVN RGFMEVETPM MQVIPGGAAA RPFITHHNAL DLDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYKDL IELTESLFRT
LAQDILGKTE VTYGDVTLDF GKPFEKLTMR EAIKKYRPET DMADLDNFDS AKAIAESIGI
HVEKSWGLGR IVTEIFEEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAQRF LDQVAAKDAG DDEAMFYDED YVTALEHGLP PTAGLGIGID
RMVMLFTNSH TIRDVILFPA MRPVK
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