Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3015 |
Symbol | |
ID | 6142729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3103152 |
End bp | 3104552 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641617884 |
Product | xanthine/uracil permease family protein |
Protein accession | YP_001745035 |
Protein GI | 170681803 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATA TAAACCATGC AGGTTCTGAC CTTATATTTG AACTGGAGGA TCGCCCTCCC TTTCATCAGG CTCTCGTTGG TGCCATTACC CATCTGTTGG CAATTTTCGT TCCGATGGTA ACCCCCGCGT TAATCGTGGG TGCGGCCTTA CAGCTTTCCG CTGAAACAAC TGCCTATCTT GTTTCAATGG CGATGATCGC CTCTGGTATT GGTACCTGGT TACAAGTAAA CCGCTATGGC ATCGTCGGTT CTGGCCTACT CTCAATTCAG TCAGTCAATT TTTCATTTGT TACGGTCATG ATTGCGCTGG GCAGCAGCAT GAAAAGCGAC GGTTTTCACG AAGAGTTAAT CATGTCGTCG CTCCTCGGCG TCTCCTTCGT TGGCGCATTT CTGGTTGTCG GCTCTTCTTT TATCCTGCCC TATTTACGTC GGGTTATTAC GCCTACCGTC AGCGGCATTG TGGTGCTGAT GATCGGCTTA AGCCTGATTA AAGTCGGCAT TATCGATTTT GGTGGAGGAT TTGCAGCCAA AAGCAGCGGT ACATTCGGCA ATTACGAACA TCTCGGCGTT GGTTTATTGG TTTTGATTGT GGTGATCGGC TTTAACTGCT GTAGCAGTCC GTTGCTACGC ATGGGAGGGA TCGCCATTGG GCTATGTGTC GGCTATATCG CATCGTTATG CCTGGGCATG GTGGATTTCA GCAGTATGCG CAATTTGCCG TTAATCACCA TCCCACATCC GTTCAAATAC GGCTTTAGTT TTAGCTTCCA TCAGTTCCTG GTGGTTGGCA CGATTTATCT GCTTAGCGTG CTGGAAGCTG TCGGCGATAT CACCGCCACG GCAATGGTTT CCCGCCGCCC CATTCAGGGG GAAGAGTATC AGTCCCGACT GAAAGGCGGC GTGCTGGCAG ACGGTCTGGT TTCTGTTATC GCCTCCGCTG TCGGATCATT ACCCTTAACC ACGTTTGCGC AAAATAATGG GGTTATTCAG ATGACTGGCG TCGCTTCACG TTATGTCGGG CGAACCATCG CGGTAATGCT GGTTATCCTC GGCTTATTTC CGATGATTGG CGGCTTCTTC ACGACCATTC CCTCGGCAGT TCTGGGAGGC GCAATGACGT TGATGTTTTC CATGATTGCC ATCGCAGGGA TTCGCATCAT CATCACCAAC GGTTTAAAGC GCCGAGAAAC ACTTATTGTC GCCACTTCTT TAGGTTTAGG GCTTGGCGTC TCCTACGATC CCGAAATTTT TAAAATATTG CCAGCCTCTA TTTATGTACT AGTTGAAAAC CCTATTTGTG CTGGCGGGTT AACTGCGATT TTATTAAATA TTATCCTCCC TGGTGGCTAC CGACAGGAAA ACGTTCTGCC TGGTATTACC TCAGCGGAAG AGATGGATTA A
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Protein sequence | MSDINHAGSD LIFELEDRPP FHQALVGAIT HLLAIFVPMV TPALIVGAAL QLSAETTAYL VSMAMIASGI GTWLQVNRYG IVGSGLLSIQ SVNFSFVTVM IALGSSMKSD GFHEELIMSS LLGVSFVGAF LVVGSSFILP YLRRVITPTV SGIVVLMIGL SLIKVGIIDF GGGFAAKSSG TFGNYEHLGV GLLVLIVVIG FNCCSSPLLR MGGIAIGLCV GYIASLCLGM VDFSSMRNLP LITIPHPFKY GFSFSFHQFL VVGTIYLLSV LEAVGDITAT AMVSRRPIQG EEYQSRLKGG VLADGLVSVI ASAVGSLPLT TFAQNNGVIQ MTGVASRYVG RTIAVMLVIL GLFPMIGGFF TTIPSAVLGG AMTLMFSMIA IAGIRIIITN GLKRRETLIV ATSLGLGLGV SYDPEIFKIL PASIYVLVEN PICAGGLTAI LLNIILPGGY RQENVLPGIT SAEEMD
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