| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2986 |
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| Symbol | lysA |
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| ID | 6146940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3066270 |
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| End bp | 3067532 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617855 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001745007 |
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| Protein GI | 170683211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0454398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACATT CACTGTTCAG CACTGATACC GATCTCACCG CCGAAAATCT GCTGCGTTTG
CCCGCAGAAT TTGGCTGCCC GGTGTGGGTC TACGATGCGC AAATTATTCG TCGGCAGATT
GCAGCGCTGA AACAGTTTGA TGTGGTGCGC TTCGCACAGA AAGCCTGTTC CAATATTCAT
ATTTTGCGCT TAATGCGTGA GCAGGGCGTG AAAGTGGATT CCGTCTCGTT AGGCGAAATA
GAGCGTGCGT TGGCGGCGGG TTACAATCCG CAAACGCACC CCGATGATAT TGTTTTTACG
GCAGATGTTA TCGATCAGGC GACGCTTGAA CGCGTCAGTG AATTGCAAAT TCCGGTGAAT
GCGGGTTCTG TTGATATGCT CGACCAACTG GGTCAGGTTT CGCCAGGGCA TCGGGTATGG
CTGCGTGTTA ATCCGGGGTT TGGTCACGGG CATAGCCAAA AAACCAATAC TGGTGGCGAA
AACAGCAAGC ACGGTATCTG GTACACCGAT CTGCCCGCCG CACTGGACGT GATACAACGT
CATCATCTAC AGCTGGTCGG CATTCACATG CACATTGGTT CTGGCGTTGA TTATGCCCAT
CTGGAACAGG TATGTGGTGC TATGGTGCGT CAGGTCCTCG AATTCGGTCA GGATTTACAG
GCTATTTCTG CGGGCGGTGG GCTTTCTATT CCTTATCAAC AGGGTGAAGA GGCGGTTGAT
ACCGAACATT ATTATGGTCT GTGGAATGCC GCGCGTGAGC AAATCGCCCG CCATTTGGGC
CACCCTGTGA AACTGGAAAT TGAACCGGGT CGCTTCCTGG TAGCGCAGTC TGGCGTGTTA
ATTACTCAGG TGCGGAGCGT CAAACAAATG GGTAGCCGCC ACTTTGTGCT GGTTGATGCC
GGGTTCAACG ATCTGATGCG TCCGGCAATG TACGGTAGTT ACCACCATAT CAGTGCCCTG
GCAGCTGATG GTCGTTCACT GGAACACGCA CCAACGGTGG AAACCGTCGT CGCCGGGCCG
TTATGTGAAT CGGGCGATGT CTTTACCCAG CAGGAAGGGG GAAATGTTGA AACCCGCGCC
TTGCCGGAAG TGAAGGCAGG GGATTATCTG GTACTGCATG ATACGGGGGC ATATGGCGCG
TCAATGTCAT CCAACTACAA TAGCCGTCCG CTGTTACCAG AAGTTCTGTT TGATAATGGT
CAGGCGCGGT TAATTCGCCG TCGCCAGACC ATCGAAGAAT TACTGGCACT GGAATTGCTT
TAA
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| Protein sequence | MPHSLFSTDT DLTAENLLRL PAEFGCPVWV YDAQIIRRQI AALKQFDVVR FAQKACSNIH
ILRLMREQGV KVDSVSLGEI ERALAAGYNP QTHPDDIVFT ADVIDQATLE RVSELQIPVN
AGSVDMLDQL GQVSPGHRVW LRVNPGFGHG HSQKTNTGGE NSKHGIWYTD LPAALDVIQR
HHLQLVGIHM HIGSGVDYAH LEQVCGAMVR QVLEFGQDLQ AISAGGGLSI PYQQGEEAVD
TEHYYGLWNA AREQIARHLG HPVKLEIEPG RFLVAQSGVL ITQVRSVKQM GSRHFVLVDA
GFNDLMRPAM YGSYHHISAL AADGRSLEHA PTVETVVAGP LCESGDVFTQ QEGGNVETRA
LPEVKAGDYL VLHDTGAYGA SMSSNYNSRP LLPEVLFDNG QARLIRRRQT IEELLALELL
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