Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2969 |
Symbol | recC |
ID | 6146657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3047691 |
End bp | 3051059 |
Gene Length | 3369 bp |
Protein Length | 1122 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617838 |
Product | exonuclease V subunit gamma |
Protein accession | YP_001744990 |
Protein GI | 170683034 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.481674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0228423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGGG TCTACCATTC CAATCGTCTG GACGTGCTGG AAGCGTTGAT GGAGTTTATT GTCGAACGCG AACGGCTGGA CGATCCTTTC GAACCAGAGA TGATTCTGGT GCAAAGTACC GGTATGGCGC AGTGGCTGCA AATGACCCTG TCGCAAAAGT TTGGTATTGC GGCAAACATT GATTTTCCGC TGCCAGCGAG CTTTATCTGG GATATGTTCG TCCGGGTGTT ACCGGAAATC CCCAAAGAGA GCGCCTTTAA CAAACAGAGC ATGAGCTGGA AACTGATGAC TCTGCTGCCG CAACTGTTGG AGCGCGAAGA CTTTACCCTG TTGCGGCATT ATCTGACTGA CGATAGTGAC AAGCGAAAAC TGTTCCAGCT TTCTTCAAAA GCGGCGGACC TGTTTGACCA GTATCTGGTC TATCGTCTGG ACTGGCTGGC ACAGTGGGAA ACAGGACATC TGGTAGAAGG GTTGGGAGAA GCACAGGCCT GGCAAGCGCC GTTGTGGAAG GCGTTGGTGG AATATACCGA CGAACTCGGG CAACCGCGCT GGCACCGCGC CAATCTCTAT CAGCGCTTTA TCGAAACGCT GGAGTCCGCG ACGACCTGCC CGCCGGGGCT ACCTTCGCGC GTCTTTATAT GCGGTATTTC CGCGTTACCG CCTGTTTATC TCCAGGCGCT ACAGGCGCTG GGTAAACATA TTGAAATCCA TCTCCTGTTT ACCAACCCCT GCCGTTATTA CTGGGGCGAC ATTAAAGATC CTGCTTATCT GGCGAAACTG CTGACTCGCC AGCGCCGACA CAGTTTTGAA GATCGCGAAT TACCGTTATT TCGCGACAGC GAAAATGCCG GACAGCTCTT TAACAGCGAT GGTGAACAGG ATGTCGGTAA CCCGCTGCTG GCCTCATGGG GCAAGCTTGG GCGCGACTAC ATTTATCTTC TTTCTGACCT GGAGGGCAGC CAGGAGCTGG ACGCTTTTGT CGATGTGACG CCAGACAACC TGCTGCATAA CATTCAGTCT GACATTCTGG AACTGGAAAA CCGCGCCGTT GCGGGTGTGA ACATCGAAGA GTTTTCCCGT AGCGATAACA AACGCCCGCT TGATCCACTG GATAGCAGTA TCACCTTCCA CGTTTGCCAT AGCCCGCAGC GTGAAGTTGA AGTTTTACAC GATCGCTTGC TGGCGATGCT GGAGGAAGAC CCGACACTTA CTCCGCGCGA CATCATCGTG ATGGTGGCCG ACATCGACAG CTACAGTCCG TTTATTCAGG CAGTGTTTGG TAGCGCACCT GCGGATCGTT ACCTGCCTTA CGCCATTTCC GACCGTCGTG CGCGGCAGTC ACATCCGGTA CTGGAAGCGT TTATCAGCCT GTTATCACTG CCTGACAGTC GCTTTGTGTC AGAGGATGTG CTGGCGCTGC TGGATGTGCC GGTGCTGGCG GCGCGGTTTG ACATCACCGA AGAAGGGCTG CGTTATTTAC GTCAGTGGGT CAACGAATCT GGCATTCGTT GGGGGATAGA TGACGACAAC GTTCGCGAGC TGGAACTCCC CGCCACCGGA CAACACACCT GGCGATTTGG CCTGACGCGT ATGTTACTAG GCTACGCGAT GGAGAGCGCG CAGGGCGAGT GGCAATCGGT TCTACCTTAT GATGAATCGA GCGGCTTAAT TGCAGAACTG GTGGGGCATC TGGCTTCACT GCTAATGCAG CTAAACATCT GGCGTCGCGG GCTGGCGCAG GAGCGTCCGC TGGAAGAGTG GTTGCCGGTT TGTCGCGATA TGCTCAACGC CTTCTTCCTG CCGGATGCGG AAACCGAAGC GGCGATGACG CTGATCGAAC AACAATGGCA GGCGATTATC GCCGAAGGTT TAGGTGCGCA GTATGGCGAC GCGGTGCCGC TGTCACTATT GCGTGATGAA CTGGCACAGC GCCTGGATCA GGAACGTATC AGCCAGCGTT TTCTCGCCGG ACCGGTTAAC ATTTGTACTC TGATGCCAAT GCGTTCCATC CCATTCAAAG TGGTTTGCCT GCTGGGAATG AACGACGGCG TTTATCCACG CCAGCTTGCG CCATTGGGCT TTGACCTGAT GAGCCAGAAA CCGAAGCGTG GCGACCGTAG CCGTCGCGAT GACGACCGCT ATCTGTTCCT GGAAGCGTTA ATTTCCGCGC AGCAAAAACT CTATATCAGC TATATCGGGC GTTCTATTCA GGATAACAGT GAACGTTTCC CGTCGGTACT GGTGCAGGAA CTGATCGACT ACATCGGGCA AAGCCATTAT CTACCGGGCG ATGAAGCGCT CAACTGTGAT GAAAGCGAGG CAAGGGTAAA AGCACATCTT ACTTGCCTCC ATACCCGAAT GCCGTTTGAT CCACAAAACT ACCAGCCAGG CGAACGACAA AGCTATGCTC GTGAATGGCT ACCCGCGGCC AGCCAGGCTG GTAAAGCACA TTCTGAATTT GTTCAGCAGC TGCCGTTTAC CTTACCGGAA ACCGTGCCGC TGGAAACGCT ACAACGATTC TGGGCACATC CGGTGCGGGC ATTTTTCCAG ATGCGTTTGC AGGTGAACTT CCGTACCGAA GACAGCGAAA TCCCCGACAC CGAGCCATTT ATTCTGGAAG GACTTAGCCG TTATCAAATC AATCAGCAGT TATTGAATGC ACTGGTTGAG CAGGATGATG CCGAACGCTT GTTCCGCCGC TTCCGGGCGG CAGGGGATTT ACCGTATGGC GCTTTTGGTG AAATTTTCTG GGAAACACAG TGCCAGGAGA TGCAGCAGCT TGCCGACAGA GTCATTGCCT GTCGCCAGCC GGGGCAGAGT ATGGAAATTG ACCTCGCCTG CAACGGTGTG CAGATAACTG GCTGGTTGCC GCAGGTGCAG TCGGATGGCC TGTTGCGCTG GCGTCCCTCT TTATTAAGTG TGGCGCAGGG AATGCAACTT TGGCTGGAAC ACCTTGTCTA CTGTGCCAGC GGTGGTAATG GTGAAAGTCG CCTTTTTCTA CGCAAAGACG GCGAGTGGCG TTTTCCGCCG CTTGCAGCCG AACAGGCTTT ACATTACCTC TCACAGCTGA TTGAAGGGTA TCGTGAAGGA ATGTCCGCGC CATTGCTGGT GTTACCTGAA AGTGGCGGCG CGTGGCTAAA AACCTGTTAT GACGCGCAAA ACGATGCCAT GCTGGATGAC GATTCCACGT TGCAAAAAGC CCGAACGAAA TTCCTTCAGG CTTACGAAGG CAACATGATG GTGCGTGGCG AAGGTGATGA TATCTGGTAT CAACGGCTCT GGCGGCAATT AACACCAGAG ACAATGGAGG CCATCGTTGA ACAGTCGCAA CGTTTCCTGT TACCGCTGTT TCGCTTTAAT CAGTCATGA
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Protein sequence | MLRVYHSNRL DVLEALMEFI VERERLDDPF EPEMILVQST GMAQWLQMTL SQKFGIAANI DFPLPASFIW DMFVRVLPEI PKESAFNKQS MSWKLMTLLP QLLEREDFTL LRHYLTDDSD KRKLFQLSSK AADLFDQYLV YRLDWLAQWE TGHLVEGLGE AQAWQAPLWK ALVEYTDELG QPRWHRANLY QRFIETLESA TTCPPGLPSR VFICGISALP PVYLQALQAL GKHIEIHLLF TNPCRYYWGD IKDPAYLAKL LTRQRRHSFE DRELPLFRDS ENAGQLFNSD GEQDVGNPLL ASWGKLGRDY IYLLSDLEGS QELDAFVDVT PDNLLHNIQS DILELENRAV AGVNIEEFSR SDNKRPLDPL DSSITFHVCH SPQREVEVLH DRLLAMLEED PTLTPRDIIV MVADIDSYSP FIQAVFGSAP ADRYLPYAIS DRRARQSHPV LEAFISLLSL PDSRFVSEDV LALLDVPVLA ARFDITEEGL RYLRQWVNES GIRWGIDDDN VRELELPATG QHTWRFGLTR MLLGYAMESA QGEWQSVLPY DESSGLIAEL VGHLASLLMQ LNIWRRGLAQ ERPLEEWLPV CRDMLNAFFL PDAETEAAMT LIEQQWQAII AEGLGAQYGD AVPLSLLRDE LAQRLDQERI SQRFLAGPVN ICTLMPMRSI PFKVVCLLGM NDGVYPRQLA PLGFDLMSQK PKRGDRSRRD DDRYLFLEAL ISAQQKLYIS YIGRSIQDNS ERFPSVLVQE LIDYIGQSHY LPGDEALNCD ESEARVKAHL TCLHTRMPFD PQNYQPGERQ SYAREWLPAA SQAGKAHSEF VQQLPFTLPE TVPLETLQRF WAHPVRAFFQ MRLQVNFRTE DSEIPDTEPF ILEGLSRYQI NQQLLNALVE QDDAERLFRR FRAAGDLPYG AFGEIFWETQ CQEMQQLADR VIACRQPGQS MEIDLACNGV QITGWLPQVQ SDGLLRWRPS LLSVAQGMQL WLEHLVYCAS GGNGESRLFL RKDGEWRFPP LAAEQALHYL SQLIEGYREG MSAPLLVLPE SGGAWLKTCY DAQNDAMLDD DSTLQKARTK FLQAYEGNMM VRGEGDDIWY QRLWRQLTPE TMEAIVEQSQ RFLLPLFRFN QS
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