| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2846 |
|---|
| Symbol | hycE |
|---|
| ID | 6146810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2920654 |
|---|
| End bp | 2922384 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641617715 |
|---|
| Product | formate hydrogenlyase, subunit E |
|---|
| Protein accession | YP_001744870 |
|---|
| Protein GI | 170681957 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit
[COG3262] Ni,Fe-hydrogenase III component G |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.15789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTAAAG AGAGTTTGAG CATGTCTGAA GAAAAATTAG GTCAACATTA TCTCGCCGCG
CTGAATGAGG CATTTCCGGG CGTCGTGCTG GACCACGCCT GGCAGACCAA AGATCAGCTA
ACCGTCACCG TGAAGGTGAA CTACCTGCCG GAAGTGGTGG AGTTTCTCTA CTACAAACAA
GGGGGCTGGC TGTCGGTGCT GTTTGGTAAC GACGAACGCA AACTGAATGG TCATTACGCC
GTTTACTACG TGCTGTCGAT GGAGAAGGGC ACCAAATGCT GGATAACCGT GCGCGTCGAA
GTTGACGCCA ACAAACCGGA ATATCCGTCC GTGACACCGC GCGTTCCGGC GGCGGTGTGG
GGCGAGCGCG AAGTGCGCGA TATGTACGGT TTGATTCCGG TAGGGCTTCC GGATGAACGT
CGTCTGGTGC TGCCGGATGA CTGGCCGGAT GAACTTTATC CGCTGCGTAA AGACAGCATG
GATTATCGTC AGCGTCCGGC ACCGACTACC GATGCTGAAA CCTACGAGTT CATCAACGAA
CTGGGCGACA AGAAAAACAA TGTCGTGCCG ATTGGTCCGC TGCACGTCAC TTCTGACGAA
CCGGGTCACT TCCGTCTGTT CGTCGATGGC GAAAACATTA TCGACGCCGA CTACCGCCTG
TTCTATGTCC ATCGCGGCAT GGAAAAACTG GCGGAAACCC GCATGGGTTA CAACGAAGTG
ACCTTCCTCT CTGACCGTGT GTGCGGGATC TGCGGCTTTG CTCACAGCAC CGCCTACACC
ACGTCGGTGG AAAACGCGAT GGGTATTCAG GTGCCAGAAC GTGCGCAGAT GATCCGCGCC
ATTCTGCTGG AGGTGGAACG CCTGCACTCG CATCTGCTCA ACCTCGGCCT GGCCTGTCAC
TTTACCGGCT TCGACTCCGG CTTTATGCAG TTCTTCCGCG TGCGTGAAAC CTCCATGAAA
ATGGCAGAGA TCCTTACCGG TGCACGTAAA ACCTACGGCC TGAACCTGAT CGGCGGGATT
CGTCGCGATC TGCTGAAAGA CGACATGATC CAGACCCGCC AGCTGGCACA ACAGATGCGT
CGTGAAGTGC AGGAGCTGGT GGATGTGCTG CTGAGCACAC CGAACATGGA ACAACGCACC
GTCGGCATTG GTCGTCTGGA CCCGGAAATC GCTCGCGACT TCAGTAACGT TGGCCCGATG
GTCCGTGCCA GCGGTCATGC CCGTGATACC CGTGCCGATC ACCCGTTTGT TGGTTATGGC
CTGCTGCCAA TGGAAGTCCA CAGCGAGCAG GGCTGCGACG TTATTTCCCG TCTGAAAGTG
CGTATCAACG AAGTCTATAC CGCGCTGAAT ATGATCGATT ACGGTCTGGA TAACCTGCCG
GGCGGCCCGC TGATGGTGGA AGGCTTTACC TACATTCCGC ACCGTTTCGC GCTGGGCTTT
GCCGAAGCGC CGCGCGGCGA CGATATCCAC TGGAGCATGA CCGGCGACAA CCAGAAGCTG
TACCGCTGGC GCTGCCGTGC GGCGACCTAC GCAAACTGGC CGACCCTGCG CTACATGCTG
CGCGGCAACA CCGTTTCCGA TGCGCCGTTG ATTATCGGTA GCCTGGACCC TTGCTACTCC
TGTACCGACC GCATGACCGT GGTCGATGTA CGTAAGAAGA AGAGCAAAGT GGTGCCGTAC
AAAGAACTCG AGCGCTACAG CATTGAGCGT AAAAACTCGC CGCTGAAATA A
|
|---|
| Protein sequence | MIKESLSMSE EKLGQHYLAA LNEAFPGVVL DHAWQTKDQL TVTVKVNYLP EVVEFLYYKQ
GGWLSVLFGN DERKLNGHYA VYYVLSMEKG TKCWITVRVE VDANKPEYPS VTPRVPAAVW
GEREVRDMYG LIPVGLPDER RLVLPDDWPD ELYPLRKDSM DYRQRPAPTT DAETYEFINE
LGDKKNNVVP IGPLHVTSDE PGHFRLFVDG ENIIDADYRL FYVHRGMEKL AETRMGYNEV
TFLSDRVCGI CGFAHSTAYT TSVENAMGIQ VPERAQMIRA ILLEVERLHS HLLNLGLACH
FTGFDSGFMQ FFRVRETSMK MAEILTGARK TYGLNLIGGI RRDLLKDDMI QTRQLAQQMR
REVQELVDVL LSTPNMEQRT VGIGRLDPEI ARDFSNVGPM VRASGHARDT RADHPFVGYG
LLPMEVHSEQ GCDVISRLKV RINEVYTALN MIDYGLDNLP GGPLMVEGFT YIPHRFALGF
AEAPRGDDIH WSMTGDNQKL YRWRCRAATY ANWPTLRYML RGNTVSDAPL IIGSLDPCYS
CTDRMTVVDV RKKKSKVVPY KELERYSIER KNSPLK
|
|---|
| |