| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2825 |
|---|
| Symbol | srlA |
|---|
| ID | 6144312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2901058 |
|---|
| End bp | 2901621 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641617694 |
|---|
| Product | PTS system, glucitol/sorbitol-specific, IIC component |
|---|
| Protein accession | YP_001744849 |
|---|
| Protein GI | 170681685 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3730] Phosphotransferase system sorbitol-specific component IIC |
|---|
| TIGRFAM ID | [TIGR00821] PTS system, glucitol/sorbitol-specific, IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0248277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0000269203 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAA CCATTACTCA TGGTGCAGAG TGGTTTATCG GGCTGTTCCA AAAGGGCGGA
GAGGTGTTTA CCGGGATGGT GACCGGCATT CTTCCGCTGT TGATTAGCCT GTTGGTTATC
ATGAACGCAC TGATTAATTT TATCGGTCAG CATCGTATTG AACGTTTTGC TCAACGTTGC
GCCGGTAACC CTGTTTCCCG TTACCTGCTG TTACCGTGCA TTGGCACGTT TGTCTTTTGC
AATCCGATGA CCTTAAGCCT GGGTCGCTTT ATGCCGGAAA AGTACAAACC CAGCTATTAC
GCGGCGGCCT CTTATAGCTG CCACTCAATG AATGGCCTCT TCCCCCATAT CAACCCTGGC
GAACTGTTTG TTTATCTTGG CATTGCCAGC GGTCTGACAA CACTGAATCT GCCACTTGGC
CCACTGGCGG TGAGTTATCT GCTGGTTGGT TTGGTCACCA ACTTCTTCCG CGGCTGGGTG
ACCGATCTGA CCACCGCCAT TTTTGAGAAA AAGATGGGCA TTCAACTTGA ACAAAAAGTT
CATCTGGCAG GAGCAACATC ATGA
|
|---|
| Protein sequence | MIETITHGAE WFIGLFQKGG EVFTGMVTGI LPLLISLLVI MNALINFIGQ HRIERFAQRC
AGNPVSRYLL LPCIGTFVFC NPMTLSLGRF MPEKYKPSYY AAASYSCHSM NGLFPHINPG
ELFVYLGIAS GLTTLNLPLG PLAVSYLLVG LVTNFFRGWV TDLTTAIFEK KMGIQLEQKV
HLAGATS
|
|---|
| |