| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2810 |
|---|
| Symbol | gshA |
|---|
| ID | 6143033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2890377 |
|---|
| End bp | 2891933 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617679 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_001744839 |
|---|
| Protein GI | 170683222 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000302956 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.00165416 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGATCCCGG ACGTATCACA GGCGCTGGCC TGGCTGGAAA AACATCCTCA GGCGTTAAAG
GGGATACAGC GTGGGCTGGA GCGCGAAACT TTGCGTGTTA ATGCTGATGG CACATTGGCA
ACAACAGGTC ATCCTGAAGC ATTAGGTTCC GCACTGACGC ACAAATGGAT TACTACCGAT
TTTGCGGAAG CATTGCTGGA ATTCATTACA CCAGTGGATG GTGATATTGA ACATATGTTG
ACCTTTATGC GCGATCTGCA TCGTTATACG GCGCGCAATA TGGGCGATGA GCGGATGTGG
CCGTTAAGTA TGCCATGCTA CATCGCAGAA GGTCAGGACA TCGAACTGGC ACAGTACGGC
ACTTCTAACA CTGGACGCTT TAAAACGCTG TACCGTGAAG GGCTGAAAAA TCGCTACGGC
GCGCTGATGC AAACCATTTC CGGCGTGCAC TACAATTTCT CTTTGCCAAT GGCATTCTGG
CAAGCGAAGT GTGGTGATAT CGCGGGCGCT GATGCCAAAG AGAAAATTTC TGCGGGCTAT
TTCCGCGTTA TCCGCAATTA CTATCGTTTC GGTTGGGTCA TTCCTTATCT GTTTGGCGCG
TCTCCGGCGA TTTGTTCTTC TTTCCTGCAA GGAAAACCAA CATCGCTGCC GTTTGAGAAA
ACCGAGTGCG GTATGTATTA CCTGCCGTAT GCGACCTCTC TTCGTTTGAG TGATCTCGGC
TATACCAATA AATCGCAAAG CAATCTTGGT ATTACCTTCA ACGATCTTTA CGAGTACGTA
GCGGGCCTTA AACAGGCAAT CAAAACGCCA TCGGAAGAGT ACGCGAAGAT TGGCATTGAG
AAAGATGGTA AGAGGCTGCA AATCAACAGC AACGTGCTGC AGATTGAAAA CGAACTGTAC
GCGCCGATTC GTCCAAAACG CGTTACCCGC AGCGGCGAGT CGCCTTCTGA TGCGCTGTTA
CGTGGCGGCA TTGAATATAT TGAAGTGCGT TCGCTGGACA TCAACCCATT CTCGCCGATT
GGTGTAGATG AACAGCAGGT GCGATTCCTC GACCTGTTTA TGGTCTGGTG TGCGCTGGCT
GATGCACCGG AAATGAGCAG TAGCGAACTT GCCTGTACAC GCGTTAACTG GAACCGGGTG
ATCCTCGAAG GTCGCAAACC GGGCCTGACG CTGGGTATCG GCTGCGAAAC CGCGCAGTTC
CCGTTACCGC AGGTGGGTAA AGATCTGTTC CGCGATCTGA AACGCGTCGC GCAAACGCTG
GATAGCATTA ACGGCGGCGA AGCGTATCAG AAAGTGTGTG ATGAACTGGT CGCCTGCTTC
GATAATCCCG ATCTGACTTT CTCTGCCCGT ATCTTAAGGT CTATGATTGA TACTGGTATT
GGCGGAACAG GCAAAGCGTT TGCTGAAGCG TACCGTAATC TGCTGCGTGA AGAGCCGCTG
GAAATTCTGC GCGAAGAGGA TTTTGTCGCC GAGCGCGAGG CGTCTGAACG CCGTCAGCAG
GAAATGGAAG CCGCTGATAC CGAACCGTTT GCGGTGTGGC TGGAAAAACA CGCCTGA
|
|---|
| Protein sequence | MIPDVSQALA WLEKHPQALK GIQRGLERET LRVNADGTLA TTGHPEALGS ALTHKWITTD
FAEALLEFIT PVDGDIEHML TFMRDLHRYT ARNMGDERMW PLSMPCYIAE GQDIELAQYG
TSNTGRFKTL YREGLKNRYG ALMQTISGVH YNFSLPMAFW QAKCGDIAGA DAKEKISAGY
FRVIRNYYRF GWVIPYLFGA SPAICSSFLQ GKPTSLPFEK TECGMYYLPY ATSLRLSDLG
YTNKSQSNLG ITFNDLYEYV AGLKQAIKTP SEEYAKIGIE KDGKRLQINS NVLQIENELY
APIRPKRVTR SGESPSDALL RGGIEYIEVR SLDINPFSPI GVDEQQVRFL DLFMVWCALA
DAPEMSSSEL ACTRVNWNRV ILEGRKPGLT LGIGCETAQF PLPQVGKDLF RDLKRVAQTL
DSINGGEAYQ KVCDELVACF DNPDLTFSAR ILRSMIDTGI GGTGKAFAEA YRNLLREEPL
EILREEDFVA EREASERRQQ EMEAADTEPF AVWLEKHA
|
|---|
| |