Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2804 |
Symbol | |
ID | 6147146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2885156 |
End bp | 2885848 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617673 |
Product | branched chain amino acid ABC transporter |
Protein accession | YP_001744833 |
Protein GI | 170680260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.1492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0100066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGAT GCAAAGACAG TTTACCGATT GTTATTAGTT ATATTCCGGT GGCCTTTGCG TTCGGTCTGA ATGCGACCCG TCTGGGATTC TCTCCTCTCG AAAGCGTTTT TTTCTCCTGC ATCATTTATG CAGGCGCGAG CCAGTTCGTC ATTACCGCGA TGCTGGCAGC CGGGAGTAGT TTGTGGGTTG CTGCACTGAC CGTCATGGCA ATGGATGTTC GCCATGTTTT GTATGGCCCG TCACTGCGTA GCCGTATTAT TCAGCGTCTG CAAAAATCGA AAACCGCCCT GTGGGCGTTT GGCCTGACGG ATGAGGTTTT TGCCGCCGCA ACCGCAAAAC TGGTACGCAA TAATCGCCGC TGGAGCGAAA ACTGGATGAT CGGCATTGCC TTCAGTTCAT GGTCATCGTG GGTATTTGGT ACGGTAATAG GGGCATTCTC CGGCAGCGGC TTGCTGCAAG GATATCCCGC CGTTGAAGCA GCATTAGGTT TTATGCTTCC GGCACTCTTT ATGAGTTTCC TGCTCGCCTC TTTCCAGCGC AAACAATCTC TTTGCGTTAC CGCAGCGTTA GTTGGTGCCC TTGCAGGCGT AACGCTATTT TCTATTCCCG TCGCCATTCT GGCAGGCATT GTCTGTGGCT GCCTCACTGC GTTAATCCAG GCATTCTGGC AAGGAGCGCC CGATGAGCTA TGA
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Protein sequence | MEGCKDSLPI VISYIPVAFA FGLNATRLGF SPLESVFFSC IIYAGASQFV ITAMLAAGSS LWVAALTVMA MDVRHVLYGP SLRSRIIQRL QKSKTALWAF GLTDEVFAAA TAKLVRNNRR WSENWMIGIA FSSWSSWVFG TVIGAFSGSG LLQGYPAVEA ALGFMLPALF MSFLLASFQR KQSLCVTAAL VGALAGVTLF SIPVAILAGI VCGCLTALIQ AFWQGAPDEL
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