Gene EcSMS35_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2804 
Symbol 
ID6147146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2885156 
End bp2885848 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID641617673 
Productbranched chain amino acid ABC transporter 
Protein accessionYP_001744833 
Protein GI170680260 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.1492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0100066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAT GCAAAGACAG TTTACCGATT GTTATTAGTT ATATTCCGGT GGCCTTTGCG 
TTCGGTCTGA ATGCGACCCG TCTGGGATTC TCTCCTCTCG AAAGCGTTTT TTTCTCCTGC
ATCATTTATG CAGGCGCGAG CCAGTTCGTC ATTACCGCGA TGCTGGCAGC CGGGAGTAGT
TTGTGGGTTG CTGCACTGAC CGTCATGGCA ATGGATGTTC GCCATGTTTT GTATGGCCCG
TCACTGCGTA GCCGTATTAT TCAGCGTCTG CAAAAATCGA AAACCGCCCT GTGGGCGTTT
GGCCTGACGG ATGAGGTTTT TGCCGCCGCA ACCGCAAAAC TGGTACGCAA TAATCGCCGC
TGGAGCGAAA ACTGGATGAT CGGCATTGCC TTCAGTTCAT GGTCATCGTG GGTATTTGGT
ACGGTAATAG GGGCATTCTC CGGCAGCGGC TTGCTGCAAG GATATCCCGC CGTTGAAGCA
GCATTAGGTT TTATGCTTCC GGCACTCTTT ATGAGTTTCC TGCTCGCCTC TTTCCAGCGC
AAACAATCTC TTTGCGTTAC CGCAGCGTTA GTTGGTGCCC TTGCAGGCGT AACGCTATTT
TCTATTCCCG TCGCCATTCT GGCAGGCATT GTCTGTGGCT GCCTCACTGC GTTAATCCAG
GCATTCTGGC AAGGAGCGCC CGATGAGCTA TGA
 
Protein sequence
MEGCKDSLPI VISYIPVAFA FGLNATRLGF SPLESVFFSC IIYAGASQFV ITAMLAAGSS 
LWVAALTVMA MDVRHVLYGP SLRSRIIQRL QKSKTALWAF GLTDEVFAAA TAKLVRNNRR
WSENWMIGIA FSSWSSWVFG TVIGAFSGSG LLQGYPAVEA ALGFMLPALF MSFLLASFQR
KQSLCVTAAL VGALAGVTLF SIPVAILAGI VCGCLTALIQ AFWQGAPDEL