Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2785 |
Symbol | |
ID | 6147483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2869952 |
End bp | 2870401 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641617654 |
Product | LysM domain/BON superfamily protein |
Protein accession | YP_001744814 |
Protein GI | 170681151 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.267708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGT TCAATTTTGT GAAAGATGCC GGAGAAAAAC TCTGGGACGC GGTTACAGGT CAGCACGATA AAGACGATCA GGCGAAGAAG GTGCAGGAGC ATCTGAACAA AACCGGTATA CCTGATGCCG ATAAAGTGAA CATTCAAATC GCCGACGGCA AAGCGACGGT CACGGGTGAT GGCCTGAGTC AGGAGGCGAA GGAGAAAATC CTTGTTGCGG TGGGGAATAT TTCCGGTATT GCCAGTGTCG ATGATCAGGT GAAAACGGCG ACACCAGCCG CTGCCAGCCA GTTTTATACC GTTAAGTCTG GCGACACTCT GAGTGCCATT TCCAAACAGG TCTACGGTAA CGCCAATCTG TACAATAAAA TCTTCGAAGC GAATAAACCG ATGCTAAAAA GCCCGGATAA AATTTACCCG GGGCAAGTGT TGCGTATTCC TGAAGAGTAG
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Protein sequence | MGLFNFVKDA GEKLWDAVTG QHDKDDQAKK VQEHLNKTGI PDADKVNIQI ADGKATVTGD GLSQEAKEKI LVAVGNISGI ASVDDQVKTA TPAAASQFYT VKSGDTLSAI SKQVYGNANL YNKIFEANKP MLKSPDKIYP GQVLRIPEE
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