| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2693 |
|---|
| Symbol | hcaC |
|---|
| ID | 6143859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2766242 |
|---|
| End bp | 2766562 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641617564 |
|---|
| Product | 3-phenylpropionate dioxygenase ferredoxin subunit |
|---|
| Protein accession | YP_001744729 |
|---|
| Protein GI | 170683920 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.77141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAA TTTATGCGTG TCCCGTTGCG GATGTGCCGG AGGGTGAGGC TCTCCGGATC
GATACCTCGC CCGTCATCGC CCTGTTCAAC GTAGGCGGCG AGTTTTATGC CATTAACGAT
CGTTGCAGCC ATGGTAATGC GTCGATGTCA GAAGGGTATC TGGAAGATGA CGCCACGGTG
GAGTGCCCGC TGCACGCCGC CAGTTTTTGC CTGAAAACGG GGAAAGCATT ATGCCTGCCC
GCCACCGATC CGCTAACCAC TTATCCAGTA CACGTTGAAG GTGGTGACAT CTTCATCGAC
TTACCGGAGG CGCAGCCATG A
|
|---|
| Protein sequence | MNRIYACPVA DVPEGEALRI DTSPVIALFN VGGEFYAIND RCSHGNASMS EGYLEDDATV
ECPLHAASFC LKTGKALCLP ATDPLTTYPV HVEGGDIFID LPEAQP
|
|---|
| |