Gene EcSMS35_2684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2684 
SymboliscR 
ID6146663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2757158 
End bp2757646 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID641617555 
ProductDNA-binding transcriptional regulator IscR 
Protein accessionYP_001744720 
Protein GI170684046 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.263059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.970271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA CATCTAAAGG GCGCTATGCC GTGACCGCAA TGCTTGACGT TGCGCTCAAC 
TCTGAAGCGG GCCCGGTACC GTTGGCTGAT ATTTCCGAAC GTCAGGGAAT TTCCCTTTCT
TATCTGGAAC AACTGTTTTC CCGTCTGCGT AAAAATGGTC TGGTTTCCAG CGTACGTGGA
CCAGGCGGTG GTTATCTGTT AGGCAAAGAT GCCAGCAGCA TCGCCGTTGG CGAAGTGATT
AGCGCCGTTG ACGAATCTGT AGATGCCACC CGTTGTCAGG GTAAAGGCGG CTGCCAGGGC
GGCGATAAAT GCCTGACCCA CGCGCTGTGG CGTGATTTGA GCGACCGTCT TACCGGTTTT
CTCAATAACA TTACTTTAGG CGAACTGGTT AATAACCAGG AAGTGCTGGA TGTGTCTGGT
CGTCAGCATA CTCACGACGC GCCACGCACC CGCACACAAG ACGCGATCGA CGTTAAGTTA
CGCGCTTAA
 
Protein sequence
MRLTSKGRYA VTAMLDVALN SEAGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVSSVRG 
PGGGYLLGKD ASSIAVGEVI SAVDESVDAT RCQGKGGCQG GDKCLTHALW RDLSDRLTGF
LNNITLGELV NNQEVLDVSG RQHTHDAPRT RTQDAIDVKL RA